Query= MSMg01no500_c21.b1 MSMg01no500_c21.b1 CHROMAT_FILE:
MSMg01no500_c21.b1 PHD_FILE: MSMg01no500_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:46 2005
(551 letters)
>mm_chr14_122419672_122420620
Length = 949
Score = 969 bits (501), Expect = 0.0
Identities = 528/543 (97%), Gaps = 12/543 (2%)
Strand = Plus / Minus
Query: 10 tccagacaaggagtccatacagcggtgctgggtgggtcttagagtgcctcactttacact 69
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 902 tccagacaaggagtccatacagcggtactgggtgggtcttagagtgcctcactttacact 843
Query: 70 cctacctccaggagcagtgtcccttggccccgtcagtgaaggaagctggtcaccgtgctc 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 cctacctccaggagcagtgtcccttggccccgtcagtgaaggaagctggtcaccgtgctc 783
Query: 130 acactgggcctgcagggcagctccaaccctgttttgagcagcagggccccagtcagcact 189
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 782 acactgggcctgcagggcagctccaaccctgtt--------cagggccccagtcagcact 731
Query: 190 gcccacggtgaccgcactgcggcaacagaagggagtgctcactgtgcaggcctcggcctt 249
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 730 gcccacggtgaccgcactgcggcaaaagaagggagtgctcactgtgcaggcctcggcctt 671
Query: 250 ctcaagacgttgtccgggttcatttttctttttggtggaattgcctaaagttttatttgg 309
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ctcaagacgttgtctgggttcatttttctttttggtggaattgcctaaagttttatttgg 611
Query: 310 agaagtatcataaaaactactgaaaagtaaaacacataaaaactttattgtaagtatcac 369
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agaagt---ataaaaactactgaaaagtaaaacacataaaaactttattgtaagtatcac 554
Query: 370 acacctagatttgcatcaatttgacacattgctgctcactgtgcagaataca-ccggtgc 428
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 553 acacctagatttgcatcaatttgacacattgctgctcactgtgcagaatacacccggtgc 494
Query: 429 agtttgcttacgggacagtcgtcaattcctacagctgctcttgctcacaggggctgcctc 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agtttgcttacgggacagtcgtcaattcctacagctgctcttgctcacaggggctgcctc 434
Query: 489 ctgcttacacctccctgactgtctgcacagtgggcactgcctcacccactacaaggggca 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctgcttacacctccctgactgtctgcacagtgggcactgcctcacccactacaaggggca 374
Query: 549 agg 551
|||
Sbjct: 373 agg 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 949
Length adjustment: 10
Effective length of query: 541
Effective length of database: 939
Effective search space: 507999
Effective search space used: 507999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_c21.g1 MSMg01no500_c21.g1 CHROMAT_FILE:
MSMg01no500_c21.g1 PHD_FILE: MSMg01no500_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:46 2005
(510 letters)
>mm_chr14_122264721_122265630
Length = 910
Score = 940 bits (486), Expect = 0.0
Identities = 501/506 (99%)
Strand = Plus / Plus
Query: 1 actgagcgaagcctggccagtgttactcaccaaggtgagttgagataggcctcacaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgagcgaagcctggccagtgttactcaccaaggtgagttgagataggcctcacaaggg 260
Query: 61 gaacaaggggacatgtgacagatcaggtgtgagggagggggtgccctcctgttcctctag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 261 gaacaaggggacatgtgacagatcaggtgtgagggagggggcgccctcctgtttctctag 320
Query: 121 ctttaatttttatctagtccatttaaaaatatttaaatgtggcaaataaaatttgccatc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 ctttaatttttatctagtccatttaaaaatatttaaatgtggtaaataaaatttgccatc 380
Query: 181 caagcgttttaagtgctgagctgggtggcattaattacattcttatcattgaaacctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagcgttttaagtgctgagctgggtggcattaattacattcttatcattgaaacctgag 440
Query: 241 gctggaaacagtggttcacccctagttacctacctctgcctgccatgtctcccatttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctggaaacagtggttcacccctagttacctacctctgcctgccatgtctcccatttcag 500
Query: 301 agattctacaacctcccaaaacagtgtgccacacactagaagccaagtactcaagcacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattctacaacctcccaaaacagtgtgccacacactagaagccaagtactcaagcacgt 560
Query: 361 ggcttgtgggggacgtctcacactcaaatcatgccaagcaccgacacacagtacacaccc 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcctgtgggggacgtctcacactcaaatcatgccaagcaccgacacacagtacacaccc 620
Query: 421 agccccattgctccgacaactttaaggatggttgctagcttgtctgtgtggctgaaaatc 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 agccccattgctccgacaactttaaggatggttgctagcttgtatgtgtggctgaaaatc 680
Query: 481 ccaacagatcagctctctctctctct 506
||||||||||||||||||||||||||
Sbjct: 681 ccaacagatcagctctctctctctct 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
