Query= MSMg01no500_i18.b1 MSMg01no500_i18.b1 CHROMAT_FILE:
MSMg01no500_i18.b1 PHD_FILE: MSMg01no500_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:12 2005
(423 letters)
>mm_chr14_50286566_50287388
Length = 823
Score = 783 bits (405), Expect = 0.0
Identities = 416/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctcaactgtaggctttcttttcccagatgactccagcttgtgtcaaattaaca 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ggaattcctcaactg-aggctttcttttcccagatgactccagcttgtgtcaaattaaca 640
Query: 64 aaaactaaccagtacacctatagatttattaatcatgggcatactagacgttaagtatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaaactaaccagtacacctatagatttattaatcatgggcatactagacgttaagtatgt 580
Query: 124 gtttgacttaactgacttaagacctcctggtcttttcattcagaaaacatctcctattct 183
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 579 gtttgacttaactgacttaagacctcctggtcttttcatgcagaaaacatctcctattct 520
Query: 184 gttactgtgtcataaagaaacatttcttagaagtgtttattggacagtgtcatcgggttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gttactgtgtcataaagaaacatttcttagaagtgtttattggacagtgtcatcgggttt 460
Query: 244 aaacatgaacagccccttctgctccaatcatttttccagatgacaaagggtagtttgtca 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaacatgaacagccccttctgttccaatcatttttccagatgacaaagggtagtttgtca 400
Query: 304 ccttgtgactccatactttgccacagaacagatacacctctaaggagatttcagaagtat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccttgtgactccatactttgccacagaacagatacacctctaaggagatttcagaagtat 340
Query: 364 cccatccctccctttttccagggttctcatttcattggtctggcttangtgccatacacc 423
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 339 cccatccctccctttttccagggttctcatttcattggtctggcttaggtgccatacacc 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_i18.g1 MSMg01no500_i18.g1 CHROMAT_FILE:
MSMg01no500_i18.g1 PHD_FILE: MSMg01no500_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:12 2005
(526 letters)
>mm_chr14_50258997_50259922
Length = 926
Score = 1002 bits (518), Expect = 0.0
Identities = 524/526 (99%), Gaps = 2/526 (0%)
Strand = Plus / Plus
Query: 1 tttcacagtcttctactagaaaggaaagttggatatgggtcctgatgggttataattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcacagtcttctactagaaaggaaagttggatatgggtcctgatgggttataattcct 260
Query: 61 accttctcatctgaagattccaggtaagaatctacccttgagttttctagctcctaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accttctcatctgaagattccaggtaagaatctacccttgagttttctagctcctaaaag 320
Query: 121 caccaccactccttggctagtggcttcttttccaatcttcagagctaacaatggcacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccaccactccttggctagtggcttcttttccaatcttcagagctaacaatggcacact 380
Query: 181 gtgtctttctaatgtagcatcactctgatttcctctttgaaggacactgatgaccatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtctttctaatgtagcatcactctgatttcctctttgaaggacactgatgaccatctt 440
Query: 241 tagtctgcccagatgatcccaaataggatctcttaattcatctataaccttctctctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagtctgcccagatgatcccaaataggatctcttaattcatctataaccttctctctcct 500
Query: 301 ttataagataactgtggtggtttgaataagaatgcccccccacacacacacataagctca 360
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 501 ttataagataactgtggtggtttgaataagaatgccccccc-c-cacacacataagctca 558
Query: 361 aatatatgaatgtttgcttcctagttagccatctgtttaggaaggattaggagttgtggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aatatatgaatgtttgcttcctagttagccatctgtttaggaaggattaggagttgtggg 618
Query: 421 cttgatgaggtacggccttgttggcagaggtatgtcactggcacgtaggcttgagatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cttgatgaggtacggccttgttggcagaggtatgtcactggcacgtaggcttgagatttg 678
Query: 481 aaaagtcctagtcagaggcctagtttctctatgttcacctttcaga 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaaagtcctagtcagaggcctagtttctctatgttcacctttcaga 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
