Query= MSMg01no502_c15.b1 MSMg01no502_c15.b1 CHROMAT_FILE:
MSMg01no502_c15.b1 PHD_FILE: MSMg01no502_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:07 2005
(645 letters)
>mm_chr14_54418176_54419214
Length = 1039
Score = 1181 bits (611), Expect = 0.0
Identities = 635/645 (98%), Gaps = 6/645 (0%)
Strand = Plus / Plus
Query: 1 cctgtttgatttgtgtttcttctctcatgctttctaacacaaatccagtgaaacaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgtttgatttgtgtttcttctctcatgctttctaacacaaatccagtgaaacaagttc 260
Query: 61 atgttcaaggggatcgttaacttacatttatcagtaaataaaacatcccctttctcaaaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttcaaggggatcgttaactta-atttatcagtaaataaaacatcccctttctcaaaa 319
Query: 121 atctttgtccctttctaaagcccttctatatattcccaaagccctgggtaatgggatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atctttgtccctttctaaagcccttctatatattcccaaagccctgggtaatgggatgga 379
Query: 181 tggaagctgggctgccgatctgaggcttggagtgagaggaatgggaagaacatgagcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggaagctgggctgccgatctgaggcttggagtgagaggaatgggaagaacatgagcact 439
Query: 241 cccactttgtctcctcggggaagccatgggctgctaagaatcgaatcgctcgccctacag 300
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cccactttgcctcctcagggaagccatgggctgctaagaatcgaatcgctcgcccta--- 496
Query: 301 tcagtcagactgaagtgggagagcagtcaaagctgagagaagactggatcccagtttcat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 -cagtcagactgaagtgggagagcagtcaaagctgagagaagactggatcccagtttcat 555
Query: 361 ggcatgtatgcatttgatcacagacacaattctgcatgttttgcttcagggctcaagtct 420
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 556 ggcatgtatgcatttgatcacagacacaattctgcatg-tttgcttcaggtctcaagtct 614
Query: 421 cttaacaggtttaatttactaaacttaacaaatattcaatatggaacctgttgagtactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cttaacaggtttaatttactaaacttaacaaatattcaatatggaacctgttgagtactt 674
Query: 481 cctaagggaccaaactcttctatcagatgttatccgtttgtcaaagacatcacgtggaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cctaagggaccaaactcttctatcagatgttatccgtttgtcaaagacatcacgtggaat 734
Query: 541 ggcaaagcagtatttaaaatgcaataaattcccattctaggtattgtagctctcttaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ggcaaagcagtatttaaaatgcaataaattcccattctaggtattgtagctctcttaaac 794
Query: 601 ttgacctttccctcgcaaaataacatttcaggggcagctactatc 645
|||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 795 ttgacctttccctcacaaaataacatttcaggggcagctactatc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1039
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1029
Effective search space: 653415
Effective search space used: 653415
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_c15.g1 MSMg01no502_c15.g1 CHROMAT_FILE:
MSMg01no502_c15.g1 PHD_FILE: MSMg01no502_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:07 2005
(634 letters)
>mm_chr14_54572993_54574026
Length = 1034
Score = 1058 bits (547), Expect = 0.0
Identities = 590/605 (97%), Gaps = 2/605 (0%)
Strand = Plus / Minus
Query: 32 catttagtggtttatgatcaatatcctaggcttgaaaattataagcctgtacttgagaca 91
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 1034 catttagtggtttatgatccatatcctaggtttgaaaattataagcctgtacttgagaca 975
Query: 92 ttgttaagatgtgtttcttttctctaggagagagggtagtgttagaatgactcacatgtc 151
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 974 ttgttaagatgcacttcttttctttaggagagagggtagtgttagaatgactcacatgtc 915
Query: 152 atgacaggctagatcaaagaactgggaaagatagcgaaagttttttgtttgtctgtttgt 211
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 914 atgacaggctagatcaaagaactgggtaggatagcgaaagttttttgtttgtctgtttgt 855
Query: 212 ttgtttgttg--tttttttgcagtgggtgttgagatcagagacaaagtattccaaatatt 269
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 854 ttgtttgttgtttttttttgcagtgggtgttgggatcagagacaaagtattccaaatatt 795
Query: 270 tttctatttgagagcactttttgagaggaaaggaacagggatacacatagggtcctggtg 329
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 794 tttctatttgagagcactttttgagaggaaaggaacagggatacacatagggtcctagtg 735
Query: 330 gggagtgcagagtggaagaatgcagtgggtttggttagaagaagcagggaacttgagcaa 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gggagtgcagagtggaagaatgcagtgggtttggttagaagaagcagggaacttgagcaa 675
Query: 390 gaatgtcatggcagagaggtgtgtctctgctttgcagatgagtggaaagtgggttagaag 449
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gtatgtcatggcagagaggtgtgtctctgctttgcagatgagtggaaagtgggttagaag 615
Query: 450 ttgggttgggtctggggaagatggtgttcttagcttaggcctgtcttaacaaggaggaag 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttgggttgggtctggggaagatggtgttcttagcttaggcctgtcttaacaaggaggaag 555
Query: 510 agagggagcaaagggtcctcttcgagatgaaaatatggcagaagtagtggcagtcaaggt 569
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agagggagaaaagggtcctcttcgagatgaaaatatggcagaagtagtggcagtcaaggt 495
Query: 570 ctggaggagaaggccaaccacgagagggttcatatttgagaagaggggcatcatagtttg 629
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctggaggagaaggcaaaccacgagagggttcatatttgagaagaggggcatcatagtttg 435
Query: 630 gagga 634
|||||
Sbjct: 434 gagga 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
