Query= MSMg01no504_m07.b1 MSMg01no504_m07.b1 CHROMAT_FILE:
MSMg01no504_m07.b1 PHD_FILE: MSMg01no504_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:28 2005
(572 letters)
>mm_chr14_72836863_72837837
Length = 975
Score = 1013 bits (524), Expect = 0.0
Identities = 559/572 (97%), Gaps = 3/572 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctctctgctcattactcg---caatgtaggcatcattgtctcactaagacccc 60
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 596 ggaattcctctctgctcatgactcgctacaatgtaggcatcattgtctcactaagacccc 537
Query: 61 cactggattcaaggcttacagggaactgtgggtttgccccatatgggtgggaatatttat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 536 cactggattcaaggcttacagggaactgtgggtttgccccatatgggtgggaatatttct 477
Query: 121 ctctttttcacttgagccaccaggacctctttttggaggaggtatctgtttcccctcttc 180
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||
Sbjct: 476 ctctttttcacttgagccaccaggaccacgttttggaggaggtatctgtttcccctcctc 417
Query: 181 tacctataagcacgaagatggagccaggtgcagtttgtgccttttctctgtattgttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tacctataagcacgaagatggagccaggtgcagtttgtgccttttctctgtattgttctt 357
Query: 241 gggttccctgaattctgcagctgtcctgtcactatgtgtggtttccaaagctcttcctgg 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 356 gggttccctgaattctgcagctgtcctgtcactctgtgtggtttccaaagctcttcccgg 297
Query: 301 catttctctctttggaatagacaccatttcttgttatactgattcttttcattcaccatg 360
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 296 catttctctctttggaatagacaccatttcttgttattctgactcttttcattcaccatg 237
Query: 361 tcatgggaaggcagtctctaatcttctatctacctcttaaagtgtgtagaaaaaaacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tcatgggaaggcagtctctaatcttctatctacctcttaaagtgtgtagaaaaaaacaaa 177
Query: 421 gaataaaatgccaatcaaagttacaataacatatgcttttagctcaataatttttaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gaataaaatgccaatcaaagttacaataacatatgcttttagctcaataatttttaatgt 117
Query: 481 attagtctctcaaatgagacccacagttaactggagagatgtccctattatctgaagatt 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 116 attagtctctcaaatgagacccacagttaactggagagatttccctattatctgaagatt 57
Query: 541 ctccagttcacacagtctgggattttatgtgt 572
||||||||||||||||||||||||||||||||
Sbjct: 56 ctccagttcacacagtctgggattttatgtgt 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 975
Length adjustment: 10
Effective length of query: 562
Effective length of database: 965
Effective search space: 542330
Effective search space used: 542330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_m07.g1 MSMg01no504_m07.g1 CHROMAT_FILE:
MSMg01no504_m07.g1 PHD_FILE: MSMg01no504_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:28 2005
(586 letters)
>mm_chr14_72656493_72657478
Length = 986
Score = 1056 bits (546), Expect = 0.0
Identities = 576/586 (98%)
Strand = Plus / Plus
Query: 1 cacagtccccttagataaacaagacctaggcacatttgaaggtttgacaaataattttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagtccccttagataaacaagacctaggcacatttgaaggtttgacaaataattttat 260
Query: 61 actgtacatactgaatgccatgccatctgtattctctggataaagctctgaagatggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgtacatactgaatgccatgccatctgtattctctggataaagctctgaagatggtgg 320
Query: 121 cctgcaaggctctgggagggagacagctttagagctcagatgaagccagggtcacttaaa 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 321 cctgcaaggctctgggagggagacagctttagagctcagatgaatccagggtcacggaaa 380
Query: 181 tcatggaaatgagcatcagactgagaatggggtcaagatcaacccttcctcaacccttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatggaaatgagcatcagactgagaatggggtcaagatcaacccttcctcaacccttcc 440
Query: 241 tttttttttcttctttccttcctgcctcccttttcccaagcatgactgactcttagactt 300
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctttgttcttctttccttcctgcctcccttttcccaagcatgactgactcttagactt 500
Query: 301 tacctctctatatatgctgtttcatttccctccagactcccacataccttagactattca 360
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 tacctctctatatattctgtttcatttccctccagactaccacataccttagactattca 560
Query: 361 taacttttcctcctctcttgttgtgactcaactcaaacttttcccccaatttcacaccct 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 taacttttcctcctctcttgttgtgactcgactcaaacttttcccccaatttcacaccct 620
Query: 421 aaacttctagtgcccagtacctcagaatgtaatttaatttgaagttgggatttcaggtta 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 aaacttctagtgcccagtacctcagaatgtaatttaatttgaagtttggatttcaggtta 680
Query: 481 agatgagaccattggggtaggctggtgtcattacaagggggttaaaatttctgcataggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agatgagaccattggggtaggctggtgtcattacaagggggttaaaatttctgcataggg 740
Query: 541 ggcctgaatatctattcaggcaggaaacattcataaaaatgtgaag 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggcctgaatatctattcaggcaggaaacattcataaaaatgtgaag 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
