Query= MSMg01no505_b21.b1 MSMg01no505_b21.b1 CHROMAT_FILE:
MSMg01no505_b21.b1 PHD_FILE: MSMg01no505_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:57 2005
(713 letters)
>mm_chr14_9321192_9322304
Length = 1113
Score = 1261 bits (652), Expect = 0.0
Identities = 685/696 (98%)
Strand = Plus / Minus
Query: 18 ctattaatataacttggaagaaattttagacttttactgaaacttggttggaacggagga 77
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 913 ctattaatataacttggaagaaattttagacttttactgaaacttggttggaatggagga 854
Query: 78 agcagtttcttactataggattttggttatttatagctctcctcatccctgttaccttgg 137
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 853 agcagtttcttactataggattttggttatttatagctctcctcacccctgttaccttgg 794
Query: 138 gtcagtaatattgcacttctaaaactgcaatgtggaagtgttactttctaatctgtttaa 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gtcagtaatattgcacttctaaaactgcaatgtggaagtgttactttctaatctgtttaa 734
Query: 198 aggtttccaatgaacatgatctgcatgcttctggcttgacttgcatttttggcctgagga 257
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aggtttcctatgaacatgatctgcatgcttctggcttgacttgcatttttggcctgagga 674
Query: 258 ttggaatatactacagtgtcacccattgtagaggcccagattagacactatcttccccca 317
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 673 ttggaatatactacagtgtcacccattgtagaggcccagattagacaccatcttccccca 614
Query: 318 agaagcttccctggactcacaagctctgagtcaccatgggtgttatgccctatcacctac 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agaagcttccctggactcacaagctctgagtcaccatgggtgttatgccctatcacctac 554
Query: 378 cactccctttcgagtgggtgagtagtatgaaccactcggtgtagtttgaaacagttcaga 437
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 553 cactccctttcgagtgggtgagtagtacaaaccactcggtgtagtttgaaacagttcaga 494
Query: 438 ggtaggatgcttttgtagactccatcttagaatagagctcggggctcggccaaagcttga 497
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 493 ggtaggatgcttttgtagactccatcttagaatagagctccgggctcagccaaagcttga 434
Query: 498 caggtgctctactatagaactaaacctcagctcttgactcatctcatatttggagttttc 557
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 433 caggtgctctactatagaactaaacctcggctcttgactcatctcatatttggagttttc 374
Query: 558 acagcagtgtttctgctgtgcagtaagagtcgtgtgtaatcccaatggagagatctctaa 617
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 373 acagcagtgtttctgctgtgcagtaagagtcgtgtgtaatcccaatagagagatctctaa 314
Query: 618 gctccagagcaagaagttcaaagttcccctagctctgttcccctcccatctgggaagaaa 677
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gctccagagcaagaagttcagagttcccctagctctgttcccctcccatctgggaagaaa 254
Query: 678 cagtgagattctttgtctgatctggacatggggctg 713
||||||||||||||||||||||||||||||||||||
Sbjct: 253 cagtgagattctttgtctgatctggacatggggctg 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1113
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1103
Effective search space: 775409
Effective search space used: 775409
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no505_b21.g1 MSMg01no505_b21.g1 CHROMAT_FILE:
MSMg01no505_b21.g1 PHD_FILE: MSMg01no505_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:57 2005
(658 letters)
>mm_chr14_9158416_9159473
Length = 1058
Score = 1185 bits (613), Expect = 0.0
Identities = 648/661 (98%), Gaps = 3/661 (0%)
Strand = Plus / Plus
Query: 1 acacttttcatgctgctccaagcaggcaccaagcaattcgccaagggtgtcagtccatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacttttcatgctgctccaagcaggcaccaagcaattcgccaagggtgtcagtccatac 260
Query: 61 tggcaattcaccttcactatactgctcatgtttgggtaacatttggagggaagagtcatt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcaattcaccttcactgtactgctcatgtttgggtaacatttggagggaagagtcatt 320
Query: 121 catgatttgttttgtggatcctttctgatgggagtttagactccttcccccgtccctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgatttgttttgtggatcctttctgatgggagtttagactccttcccccgtccctctg 380
Query: 181 tccctccgtccctccgtccctctgtccctctgtccctctgtccctccttccagacagaat 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tccctccgtccctccgtccctctgtccctctgtccctccgtccctccttccagacagaat 440
Query: 241 acagagtattgttgtaatctgttctttgggtggtgtggagagactcactttaccctcatg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagagtagtgttgtaatctgttctttgggtggtgtggagagactcactttaccctcatg 500
Query: 301 cctggtgatgctcactttttccttcagagatgttgccttccttctcctccttccacttct 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 cctggtgatgctcactttttccttcagagatgttgccttccttcttctccttccacttct 560
Query: 361 t---tcttctcaacttcctcttcttcctccacctcctccttcccacctcctcttgcattt 417
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 tctttcttctcaacttcctcttcttcctccacctcctcctttccacctcctcttgcattt 620
Query: 418 caacctcctcttcctcatgcgcttcaccccttccccctccaacctccttcttctctactt 477
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 caacctcctcttcctcatgcgcttcaccccttccccctccaacctctttcttctctactt 680
Query: 478 cttcctcttccacctccttcatctcctccacttctacgttcactccctcctcctcatgca 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttcctcttccacctccttcatctcctccacttctacgttcactccctcctcctcatgca 740
Query: 538 cttccctccccctcctcctttaccctcctcctccactttctcctcttccacatctactgt 597
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 741 cttccctccccctcctcctttaccctcctcctccactttctcctcttcctcatccactgt 800
Query: 598 ctcctcctctgccattcccttcctcatgagctgggatggagctaccatcctgggctcgtc 657
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctcctcctccaccattcccttcctcatgagctgggatggagctaccatcctgggctcgtc 860
Query: 658 t 658
|
Sbjct: 861 t 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
