Query= MSMg01no505_c13.b1 MSMg01no505_c13.b1 CHROMAT_FILE:
MSMg01no505_c13.b1 PHD_FILE: MSMg01no505_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:00 2005
(649 letters)
>mm_chr14_19230729_19231777
Length = 1049
Score = 1201 bits (621), Expect = 0.0
Identities = 642/649 (98%)
Strand = Plus / Plus
Query: 1 accttcctggaaccaggaaagaatatagccaacaataagtaaaaagtcaccctgctgaac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttcctggaaccaggaaagaatatagccaacaataagtaaaaagtcaccctgctgaat 260
Query: 61 atggagagaacttgtacttggaagcagttccatcctactgacacggagtacgtatgataa 120
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggagagaacttgcatttggaagcagttccatcctactgacacggagtacgtatgataa 320
Query: 121 accaaccttggtctcagcacccctcaaacgtacatcatccatgtttctacagtaagactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 accaaccttggtctcagcacccctcaaacgtacatcatccatgtttctacaataagactt 380
Query: 181 ggactggttggttctgcccatggggcaatgtttcagaagtttgaaaatgttcacatggca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 ggactggttggttctgcccatggggcaatgtttcagaagtttgaaaatgttcacatagca 440
Query: 241 acatggttttccttcatcagagaagctccagagaaaactgtgactcacggtcgtgaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatggttttccttcatcagagaagctccagagaaaactgtgactcacggtcgtgaaccc 500
Query: 301 tcccttggtgagggtttttaaaaataacccacagtctctatttttagagagcctgtggag 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcccttggtgaggatttttaaaaataacccacagtctctatttttagagagcctgtggag 560
Query: 361 ctgccctgctgcagtggtctcagatttatatagagagtaattacgaggctctcctccctc 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 ctgccctgctgcagtggtctcagatttatagagagagtaattacgaggctctcctccctc 620
Query: 421 aggagacagctattgcctgaggttcttgtggaaatgggaatgtttggtcttagacatctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggagacagctattgcctgaggttcttgtggaaatgggaatgtttggtcttagacatctc 680
Query: 481 tggctcctgaggtaaaggaggccgcccttccatattccactactgaactggaaggagctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggctcctgaggtaaaggaggccgcccttccatattccactactgaactggaaggagctg 740
Query: 541 gtgaatcccatagtgaagccaatctgaggagtcttagctttggggcagtgttataaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgaatcccatagtgaagccaatctgaggagtcttagctttggggcagtgttataaatag 800
Query: 601 gggcccaagcaaaaacagtttataaagcagacctgccagtcagtgctaa 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gggcccaagcaaaaacagtttataaagcagacctgccagtcagtgctaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_c13.g1 MSMg01no505_c13.g1 CHROMAT_FILE:
MSMg01no505_c13.g1 PHD_FILE: MSMg01no505_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:00 2005
(579 letters)
>mm_chr14_19416456_19417434
Length = 979
Score = 1081 bits (559), Expect = 0.0
Identities = 571/575 (99%), Gaps = 2/575 (0%)
Strand = Plus / Minus
Query: 6 ttcttcctgtagcaattctttctaagtttgtcagtttgaaagttgcttgcattaagaagc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttcttcctgtagcaattctttctaagtttgtcagtttgaaagttgcttgcattaagaagc 604
Query: 66 ttttacatctgaacttagtattaagattcttctccctgccttttaccagacactctgcta 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttttacatctgaacttagtattaagattcttctccctgccttttaccagacactctgcta 544
Query: 126 tcgcagtttttcctcctagaaaccaccatttatgtgttcttagtttcttttattatttta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tcgcagtttttcctcctagaaaccaccatttatgtgttcttagtttcttttattatttta 484
Query: 186 ttctgtttgtatgattttagtgctaagaatggagccaatgcgctgccaacaatgacttga 245
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 483 ttctgtttgtatgattttagtgctaagaatggagccaacgcgctgccaacaatgacttga 424
Query: 246 tgnt-agtgttgggtggcctagaccaccaagtgctgacttgtactcacccaaactgaatt 304
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tg-tcagtgttgggtggcctagaccaccaagtgctgacttgtactcacccaaactgaatt 365
Query: 305 cttctctgctataaccagtgtcttagatgtttgcttcctccaaattatctacacctttgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cttctctgctataaccagtgtcttagatgtttgcttcctccaaattatctacacctttgt 305
Query: 365 gtgtgaattcactaaggaattgggcaaaagtatcagagttgtgcatctggccattgttag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtgtgaattcactaaggaattgggcaaaagtatcagagttgtgcatctggccattgttag 245
Query: 425 tggaagacccagaaaacacaaacggtgagagaatgttcagtgggacttgcctacaatccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tggaagacccagaaaacacaaacggtgagagaatgttcagtgggacttgcctacaatccc 185
Query: 485 tgaacataggggatgaggcaggaaaattgttagtttgcagctagcctaagctacataatg 544
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tgaacataggggctgaggcaggaaaattgttagtttgcagctagcctaagctacataatg 125
Query: 545 agcctgtgtaggagaaaaaataaaaaggaaagaag 579
|||||||||||||||||||||||||||||||||||
Sbjct: 124 agcctgtgtaggagaaaaaataaaaaggaaagaag 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
