NATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTCTAGTTACAAAAAGAAGCCACAATGGCAGGAATGTATAGAA
GATCTCAGTTAAGGGGGTTGAAAAGACTGCTCAAGCTTTGCTTGCTATGT
CACTTCTAATCGCTACCTAAACAATATATAAGTAAAAAAAGCCACAGTTT
TGTGACTCTGTTTAAAATTACAGTTTTCAATGTTCCTGTGATGTCCATGG
CTGTACAGTCCTCGGCAATATTTGTCAATCATTCCAAGTTGACTTGATTT
CTTGAAAAAATTGTTTTGTAATTTCTAATATTTGAATTTGTTAATATATT
CTTTGTAAGAGTAATTATTTCAAACATTTAATATATTCAGATAGAATGAT
AACCATTAAACTAATTATATTAATAATAAGTGGAGACATTGCTTCAAGAT
TAACACTACTATAGGCCTCCCATATTTGTTTGACTGACAAAAAATGGCAT
ATAATAATCACATATATATGTATGTAACATTCTAAATTTTTCTTCATATA
TATAAATTTCAATCTTATATAATATTTGAGTCATATAAGACATTAATTTA
TAAAGGGATAAAATTTAAGCTATGGAAACCAGAACTAGAATTTTAGAGAA
AAGTGGGAATATAAAATTGAATTTGATGTTAAGACAAATAAATTTTATAT
TCTAGTGTGTTTTGACATTAAGTATCATGTAATGAAGAAAATCCAGAAAA
AGTAGCCTTTCCTACATAATTTGATTTC

TACTGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTATCCCTGTACCCCATTTT
TAATAGGATTATTGGGTTTTCTGGAGTCTAACTTCTTGAGTTCTTTATAT
ATAATAGATATTAGCCCCCTATTGAATTTAGGATTGGTAAAGACCTTTTC
CCAATCTGTTTGTTTCCTTTTTATCATATTGACAGTGTTCGTTGCCTTAC
AGAAGCTTTGCAATTTGATGAAATCCTATTTGTCCATTCTTGACCTTACA
TCACAAAGGGTCTCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTAT
AGGGCTTTGCAGTCCCATAGGAGGAACAACAATATGAACTAAGCAGTACC
CTCAGAGCTCCCTGGGTCTAAACCATCAATCAAAGAAAATACATGGTGGG
TCTCATGACTCATCAATGGGAGGAGAGGCCATTGGTCCTGTGAAGGTTTG
ATGCCACAGTATAGGGGAATGCCATGGCCAGGAAGCAGAAGTGGGTGGGT
TGGGGAGCAGGAGGGAGGGGGAGGNNNTTTNTTTTNNTTTTTTTTTTGTT
TTGTTTTGGTGTTGTTTTGTTTCTGGTTTGTTTTTTTGTGTGTTGTTGTT
TTTGTTTTGTGTTTTGTTTGTGTTTTTTGGTTGNGTTTTTGTTTGTTTGC
TGGTTTGTGGGTTTGTCGTTGTTTTTGGGTTGTGTGTTGTTTTCTGCTTT
TT

Query= MSMg01no505_p21.b1 MSMg01no505_p21.b1 CHROMAT_FILE:
MSMg01no505_p21.b1 PHD_FILE: MSMg01no505_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:01 2005
         (633 letters)



>mm_chr14_96919678_96920710
          Length = 1033

 Score = 1201 bits (621), Expect = 0.0
 Identities = 627/629 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttctagttacaaaaagaagccacaatggcaggaatgtatagaagatctcagtta 64
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 gaattcttctagggacaaaaagaagccacaatggcaggaatgtatagaagatctcagtta 774

                                                                       
Query: 65  agggggttgaaaagactgctcaagctttgcttgctatgtcacttctaatcgctacctaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 agggggttgaaaagactgctcaagctttgcttgctatgtcacttctaatcgctacctaaa 714

                                                                       
Query: 125 caatatataagtaaaaaaagccacagttttgtgactctgtttaaaattacagttttcaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 caatatataagtaaaaaaagccacagttttgtgactctgtttaaaattacagttttcaat 654

                                                                       
Query: 185 gttcctgtgatgtccatggctgtacagtcctcggcaatatttgtcaatcattccaagttg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gttcctgtgatgtccatggctgtacagtcctcggcaatatttgtcaatcattccaagttg 594

                                                                       
Query: 245 acttgatttcttgaaaaaattgttttgtaatttctaatatttgaatttgttaatatattc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 acttgatttcttgaaaaaattgttttgtaatttctaatatttgaatttgttaatatattc 534

                                                                       
Query: 305 tttgtaagagtaattatttcaaacatttaatatattcagatagaatgataaccattaaac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tttgtaagagtaattatttcaaacatttaatatattcagatagaatgataaccattaaac 474

                                                                       
Query: 365 taattatattaataataagtggagacattgcttcaagattaacactactataggcctccc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 taattatattaataataagtggagacattgcttcaagattaacactactataggcctccc 414

                                                                       
Query: 425 atatttgtttgactgacaaaaaatggcatataataatcacatatatatgtatgtaacatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atatttgtttgactgacaaaaaatggcatataataatcacatatatatgtatgtaacatt 354

                                                                       
Query: 485 ctaaatttttcttcatatatataaatttcaatcttatataatatttgagtcatataagac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctaaatttttcttcatatatataaatttcaatcttatataatatttgagtcatataagac 294

                                                                       
Query: 545 attaatttataaagggataaaatttaagctatggaaaccagaactagaattttagagaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 attaatttataaagggataaaatttaagctatggaaaccagaactagaattttagagaaa 234

                                        
Query: 605 agtgggaatataaaattgaatttgatgtt 633
           |||||||||||||||||||||||||||||
Sbjct: 233 agtgggaatataaaattgaatttgatgtt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)