Query= MSMg01no506_b13.b1 MSMg01no506_b13.b1 CHROMAT_FILE:
MSMg01no506_b13.b1 PHD_FILE: MSMg01no506_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:10 2005
(692 letters)
>mm_chr14_29245798_29246889
Length = 1092
Score = 1239 bits (641), Expect = 0.0
Identities = 677/693 (97%), Gaps = 8/693 (1%)
Strand = Plus / Plus
Query: 4 ggaattccatggtgttccggtacttgcgtttcaatctgaggggtaaattggagttgagtc 63
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatggtgaagcggtacttgcatttcaatctgaggggtaaattggagttgagta 263
Query: 64 agtaatgtggtgacattctagacagaaggaacagcaggtgcccaggcctaacaaatggat 123
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 agtaatgtggtgacattctagacagaaggaacagcaggtgcccaggcctagcaaatggat 323
Query: 124 gtcttcgtgaacacagcagtacagagtggagagcggttggcaaggccacacgaggtatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtcttcgtgaacacagcagtacagagtggagagcggttggcaaggccacacgaggtatta 383
Query: 184 agtagagtcctctgatcttctccaagatgcacattgtgcttatgctatatggctctgggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtagagtcctctgatcttctccaagatgcacattgtgcttatgctatatggctctgggc 443
Query: 244 tggaagttacctttagagcacaccaagttatagttttc----tgtttggctttccgtggt 299
||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 444 tggaagttacctttagagcacaccaagttatag----caagctgtttggctttccgtggt 499
Query: 300 agcagagctgacttcaaacataaataacctcccctggggaaaccaggagaaacaaaatat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcagagctgacttcaaacataaataacctcccctggggaaaccaggagaaacaaaatat 559
Query: 360 agactccattgcatgcagagaagcctggaagggcaagactagctagaatgggctacaggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agactccattgcatgcagagaagcctggaagggcaagactagctagaatgggctacaggc 619
Query: 420 tggaggggcagcatccaaggtacgtgacagggttggagggtccttctcaatggctgctcg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggaggggcagcatccaaggtacgtgacagggttggagggtccttctcaatggctgctcg 679
Query: 480 cattctttggtgcatgtctgtccacactgttggtccacagatggctaccttaactttgct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cattctttggtgcatgtctgtccacactgttggtccacagatggctaccttaactttgct 739
Query: 540 cacactgcccactgctgtgtcaggatgctcactgtgttagcatgccacgtacctcttcct 599
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 740 cacactgcccactgctgtgtcaggatgcccactgtgttagcatgccacgtacctcttcct 799
Query: 600 atccccaactctgcttgctatttgcaactgttactacctgctaccttctaggccctcagt 659
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 800 atccccaactctgcttgctatttgcaactgttactacctgctaccttctagaccctcagt 859
Query: 660 tgtatgtcaaaagaactttttatcctcttctca 692
|||||||||||||||||||||||||||||||||
Sbjct: 860 tgtatgtcaaaagaactttttatcctcttctca 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_b13.g1 MSMg01no506_b13.g1 CHROMAT_FILE:
MSMg01no506_b13.g1 PHD_FILE: MSMg01no506_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:10 2005
(620 letters)
>mm_chr14_29451727_29452746
Length = 1020
Score = 1176 bits (608), Expect = 0.0
Identities = 617/620 (99%)
Strand = Plus / Minus
Query: 1 catggactcaccctgcggtcctgggcagcaatcccaaaaggtaatgaacttgaactaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 catggactcaccctgcggtcctgggcagcaatcccaaaaggtaatgaacttgaactaaac 761
Query: 61 aagcctcctcattggctggtgctgttgatgttgtaaaagactctgcccaatggctttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aagcctcctcattggctggtgctgttgatgttgtaaaagactctgcccaatggctttggg 701
Query: 121 cctgagtaaatgttggcttggctgacctggtccactgagatgaattgagcatgactaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cctgagtaaatgttggcttggctgacctggtccactgagatgaattgagcatgactaagg 641
Query: 181 tgtaaggatgccagcgcttccattaactgaggaggcatgcaggggcagcagagaggggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tgtaaggatgccagcgcttccattaactgaggaggcatgcaggggcagcagagaggggcc 581
Query: 241 gcataccaaagccacaaacaaagactcctatccaagcaggccagtttcggggaacagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gcataccaaagccacaaacaaagactcctatccaagcaggccagtttcggggaacagctg 521
Query: 301 gggagaaacgggagaagacagaccttgaggactctgggggacaggcttctgaactacagc 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gggagaaatgggagaagacagaccttgaggactctgggggacaggcttctgaactacagc 461
Query: 361 ccgaggaagtatgtgatagcttacaacagatacgagcccagcctccctgcctatgaagcg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccgaggaagtatgtgatagcttacaacagatacgagcccagcctccctgcctatgaagca 401
Query: 421 agcttaacactcacctgcatttcctggtaactaagaaatcactcactgtaaggattaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 400 agcttaacactcacctgcatttcctggtaactaagaaatcactcactgtaaggatcaagg 341
Query: 481 gacagggcatgggagaagaaataaaaacacttacatcctcaaaagggacatagcaacatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gacagggcatgggagaagaaataaaaacacttacatcctcaaaagggacatagcaacatc 281
Query: 541 acacaccactgactggggtagggtggtaaagggaggggaacaaatcaaaggacttcaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 acacaccactgactggggtagggtggtaaagggaggggaacaaatcaaaggacttcaatt 221
Query: 601 ttgaggacattactttagga 620
||||||||||||||||||||
Sbjct: 220 ttgaggacattactttagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
