Query= MSMg01no506_l06.b1 MSMg01no506_l06.b1 CHROMAT_FILE:
MSMg01no506_l06.b1 PHD_FILE: MSMg01no506_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:00 2005
(667 letters)
>mm_chr14_106726208_106727275
Length = 1068
Score = 1160 bits (600), Expect = 0.0
Identities = 651/668 (97%), Gaps = 1/668 (0%)
Strand = Plus / Plus
Query: 1 atcaattatcatgaaattagtatgtcttcagtggtttaatttggaatctgaatttgttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcaattatcatgaaattagtatgtcttcagtggtttaatttggaatctgaatttgttag 260
Query: 61 -aaaaaaaggtaaaggtgtgtcacttaaatatgagtccatcaggtcatcaaaggctttca 119
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 261 gaaaaaaaggtaaaggtgtgtcacttaaatatgagtccatcaggtcttcaaaggcttcca 320
Query: 120 gaatgtatttaggtattgggaaacacaaccaacagcctggaaagatgttaacatttggcg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gaatgtatttaggtattgggaaacacaaccaacagcctggaaagatgttaacatttggtg 380
Query: 180 acagctttggaaagcatatagagaaatggtcactttgtgtcagaggatggaatatcgtta 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 acagctttggaaagcatatagagaaatagtcactttgtgtcagaggatggaatatcgtta 440
Query: 240 ttcacactgtcaatgttatgaatgctgcaaataaagactcagattaatgagagagaggtc 299
||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 ttcacactgtcaatgggaggaatgctgcaaataaagactcagattaatgagagataggtc 500
Query: 300 agaccacgagctatgagagaacgagtgccatatcatgattctagacatttctgtgacctt 359
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaccacgagctatgacagaacgggtgccatatcatgattctagacatttctgtgacctt 560
Query: 360 gggtaaggaatgttagtttatgtgtgggtgtttgcagcgttcattattattgtttacttc 419
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 ggataaggaatgttagtttatgtgtgggtgtttgcagcattcattattattgtttacttc 620
Query: 420 agagtctttcagatgagtgggtgaattagagaattcctagaaagagtgaaagaaatgcct 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 agagtctttcagatgagtgggtgaattagagaattcctagaaagagtgaaagaaatgcat 680
Query: 480 gatacttattgtttgctcttttagcagtagttcatattttaatgctttttttgtttacat 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 gatacttattgtttgctcttttagcagtagttcgtattttaatgctttttttgtttacat 740
Query: 540 aaaagcagtctccattagaatacttgacaaaatatacagggatgttttgagtctctctat 599
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaagcattctccattagaatacttgacaaaatatacagggatgttttgagtctctctat 800
Query: 600 tttaaactgccaggcagaacaaagtacctggtgaatagttgttcagtcacagcccatagg 659
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 801 tttaaactgccaggcagaacaaagtacctggtgaatggttgttcagtcacagcccatagg 860
Query: 660 aaattggt 667
||||||||
Sbjct: 861 aaattggt 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1068
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1058
Effective search space: 695106
Effective search space used: 695106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_l06.g1 MSMg01no506_l06.g1 CHROMAT_FILE:
MSMg01no506_l06.g1 PHD_FILE: MSMg01no506_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:00 2005
(614 letters)
>mm_chr14_106906607_106907620
Length = 1014
Score = 1143 bits (591), Expect = 0.0
Identities = 609/615 (99%), Gaps = 2/615 (0%)
Strand = Plus / Minus
Query: 1 acacccttctgtaattccagttcctgaggattcttgccctattctgcaccctgtgggtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 acacccttctgtaattccagttcctgaggattcttgccctattctgcaccctgtgggtac 568
Query: 61 ctgagctaacatgcaaacagatacacaaataattttgaacaatgataaaaataacttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctgagctaacatgcaaacagatacacaaataattttgaacaatgataaaaataacttaca 508
Query: 121 aatttacatgtagtatttcttataaagttgatttaatgaaatttattaattctgaaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aatttacatgtagtatttcttataaagttgatttaatgaaatttattaattctgaaatta 448
Query: 181 ataaaaatacaattaccgagatatattgctgaatatggtaatttcagttacatgtatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ataaaaatacaattaccgagatatattgctgaatatggtaatttcagttacatgtatctg 388
Query: 241 tattcttc-ataattgtatgtctctctatatgaagaaacaaaaactaattgcacagcagc 299
|||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tattcttcga-aagtgtatgtctctctatatgaagaaacaaaaactaattgcacagcagc 329
Query: 300 atgcacattcgcaacagctggagtgtgttgatataaagaatagaaaatttagatatgaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atgcacattcgcaacagctggagtgtgttgatataaagaatagaaaatttagatatgaaa 269
Query: 360 tatgtaattctttttcagtaaacgagtctttgctctgtgggcatccacctgacagataaa 419
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatgtaattctttttcagtaaatgagtctttgctctgtgggcatccacctgacagataaa 209
Query: 420 gtccatacaaattgaggaaaacagaatatattgattataagtactttgaaaatacattca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gtccatacaaattgaggaaaacagaatatattgattataagtactttgaaaatacattca 149
Query: 480 tagaaatatctagactcctttgagcaaacagggatatcaaacgctaagcaagttgatact 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tagaaatatctagactcctttgagcaaacagggatatcaaacgctaagcaagttgatact 89
Query: 540 taaagttcattatcacacagactagccaggtatatcaggatgctatagattgtggaacgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 taaagttcattatcacacagactagccaggtatatcaggatgctatagattgtggaacgg 29
Query: 600 attgcaacatacagg 614
||| ||| |||||||
Sbjct: 28 attacaagatacagg 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
