NNNNGGGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCACCTATTACAGAATAAAGTAAACGCCTGAGTCTTA
GAATGGAAGCTAAAATATAGAATAAAATTTTGTAGTTTATGTGAAAACTT
AATATTCTGTCAGTTGTTATTTACTAGTTTAAAGGTTAGGACTTGGTTTC
ATTATTACAGAATCATCAGGCATGGAATTTGTTTCTTATTCATGTAGTGA
TTGCATTTAATTTTCTGACAGAAACGAAAGCATTATTGGAAATACTAACA
CTACAGCATCACTATGGGCTGGTCAATTGTCTCAGAAATAAAGGCTTGAT
GTTAAGCCTGATACCATATTTCATTTACACACACACACACACACACACAC
AGAGAGAGAGAGAGAGAGAGAGAGAGACTGTCACAGATATACACACATTC
ACACATGCATTAAATAAATGTAGAAAAATATAATTTTCATGAAAATAAGG
CGTAACAAACAAAAGAAAAGTGAAAGCCTTCACACATAGATTGCAGGCTC
TGTGGAACCACATTAATCAGAGCTATGAACTGCTCCTCCCGTGCTCTATC
ACTTACATATTCCAGAGATTACTTGAGCCACCAGCTTCTCAGTGAATCTA
AATAACATATTGCCTTAGATTAATTTGCTCCTTACAAAATCAATTGTATA
GATATTAATTGTGTATCTGAGAATTGAAAATGTACN

CCCTTCGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTACAAAACTTT
TATCATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACG
AGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACA
TTGATGGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACC
TACTTGGTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAG
CGAGAATTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGT
CTGAAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGT
AATAGTGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATCT
TGTGAAATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGA
TAGAACTCTGCAGTAATCCTGTCTGGTCCTGGGTTTTTTTTGGCTGGGAG
ACTATGAATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTTGAA
GGTCAATTTGATCCTGATTCAACTTTGGTACCTGGTATCTTTCCAGAAAT
TTGTCCATTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTA
GAAGGATCTGATGGTGTTTTGGATTTCTTCANGATCTG

Query= MSMg01no509_d04.b1 MSMg01no509_d04.b1 CHROMAT_FILE:
MSMg01no509_d04.b1 PHD_FILE: MSMg01no509_d04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:22 2005
         (552 letters)



>mm_chr14_93152753_93153704
          Length = 952

 Score =  955 bits (494), Expect = 0.0
 Identities = 546/582 (93%), Gaps = 30/582 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   aataaagtaaacgcctgagtcttagaatggaagctaaaatatagaataaaattttgtagt 60
           ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 171 aataaagtaaacgcctgcgtcttagaatggaaggtaaaatatagaataaaattttgtagt 230

                                                                       
Query: 61  ttatgtgaaaacttaatattctgtcagttgttatttactagtttaaaggttaggacttgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttatgtgaaaacttaatattctgtcagttgttatttactagtttaaaggttaggacttgg 290

                                                                       
Query: 121 tttcattattacagaatcatcaggcatggaatttgtttcttattcatgtagtgattgcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tttcattattacagaatcatcaggcatggaatttgtttcttattcatgtagtgattgcat 350

                                                                       
Query: 181 ttaattttctgacagaaacgaaagcattattggaaatactaacactacagcatcactatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttaattttctgacagaaacgaaagcattattggaaatactaacactacagcatcactatg 410

                                                                       
Query: 241 ggctggtcaattgtctcagaaataaaggcttgatgttaagcctgataccatatttcattt 300
           |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 411 ggctggtcaattgtcttagaaataaaggcttgatgttaagcctgatactatatttcattt 470

                                                                       
Query: 301 a----------------------cacacacacacacacacacacacagagagagagagag 338
           |                      |||||||||||||||||||||||||||||||||||||
Sbjct: 471 atacacacacacacacacacacacacacacacacacacacacacacagagagagagagag 530

                                                                       
Query: 339 agagagagagaga--------ctgtcacagatatacacacattcacacatgcattaaata 390
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agagagagagagagagagagactgtcacagatatacacacattcacacatgcattaaata 590

                                                                       
Query: 391 aatgtagaaaaatataattttcatgaaaataaggcgtaacaaacaaaagaaaagtgaaag 450
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 591 aatgtagaaaaatataattttcataaaaataaggcgtaacaaacaaaataaaagtgaaag 650

                                                                       
Query: 451 ccttcacacatagattgcaggctctgtggaaccacattaatcagagctatgaactgctcc 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ccttcacacatagattgcaggctctgtggaaccacattaatcagagctatgaactgctcc 710

                                                     
Query: 511 tcccgtgctctatcacttacatattccagagattacttgagc 552
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tcccgtgctctatcacttacatattccagagattacttgagc 752


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)