Query= MSMg01no510_e24.b1 MSMg01no510_e24.b1 CHROMAT_FILE:
MSMg01no510_e24.b1 PHD_FILE: MSMg01no510_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:52 2005
(695 letters)
>mm_chr14_92266521_92267615
Length = 1095
Score = 1305 bits (675), Expect = 0.0
Identities = 687/691 (99%)
Strand = Plus / Plus
Query: 5 gaattcttataatattccaccagagacaactgataaataaaatagtcaaacgttttagag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttataatattcaaccagagacaactgataaataaaatagtcaaacgttttagag 264
Query: 65 cctagccaagtttaaaggatttgaaagatagctacttgttcatctatccagttcacttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctagccaagtttaaaggatttgaaagatagctacttgttcatctatccagttcacttct 324
Query: 125 aaatgtacaatgctttgacttggcaaaataatttttcatctcaatgatatcatagttcta 184
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaatgtacaatgctttgactaagcaaaataatttttcatctcaatgatatcatagttcta 384
Query: 185 ttcgcctttctgaattttggtaggtaaatggtcttgcgtaggaaatgttttctcatataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcgcctttctgaattttggtaggtaaatggtcttgcgtaggaaatgttttctcatataa 444
Query: 245 aatgaagagagaaaaatgcacatgttactactctttgactttcttaatctcaatattcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 445 aatgaagagagaaaaatgcacatgttactactctttgactttcttaatctcaaaattcaa 504
Query: 305 tggttttttgaattgtaatgttcttggtttatattttacagtgtcttttgtagttagtat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggttttttgaattgtaatgttcttggtttatattttacagtgtcttttgtagttagtat 564
Query: 365 gtaggataattgtttgctgattaaatatatgggagaaatattaacaagtttataaaagta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtaggataattgtttgctgattaaatatatgggagaaatattaacaagtttataaaagta 624
Query: 425 aaggtaattacatgacaacttatacaatataaaaataagtagattgtgcttactagggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaggtaattacatgacaacttatacaatataaaaataagtagattgtgcttactagggaa 684
Query: 485 ggggacatgaattgtttaaatgatataacatttttaactttcaatattttaacatctagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggggacatgaattgtttaaatgatataacatttttaactttcaatattttaacatctagg 744
Query: 545 ttcttaaaataaagtatttcataatctttctttatattttcaatatttatacacctttca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttcttaaaataaagtatttcataatctttctttatattttcaatatttatacacctttca 804
Query: 605 ctttgcaattggattctgccatgataaagctactataagtattaaataatctaagtaaat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctttgcaattggattctgccatgataaagctactataagtattaaataatctaagtaaat 864
Query: 665 acttgcattacatataatctcattttccaat 695
|||||||||||||||||||||||||||||||
Sbjct: 865 acttgcattacatataatctcattttccaat 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_e24.g1 MSMg01no510_e24.g1 CHROMAT_FILE:
MSMg01no510_e24.g1 PHD_FILE: MSMg01no510_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:52 2005
(653 letters)
>mm_chr14_92461166_92462218
Length = 1053
Score = 891 bits (461), Expect = 0.0
Identities = 482/493 (97%), Gaps = 8/493 (1%)
Strand = Plus / Minus
Query: 164 gggtgccttgtagagcctcaatagttgaagatatgcctaatctcagtgcaacgtgatatg 223
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1053 gggtgccttgtagagcctcaagagttgaagatatgcctaatctcagtgcaacgtgatata 994
Query: 224 ccaaggctggttgctatccata----ttttatctccccttttctgaagagaaaaggaaga 279
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 993 ccaaggctggttgctatccataggag----atctccccttttctgaagagaaaaggaaga 938
Query: 280 ggagtggatggacagggggaggaaggagaggtgcaggggaagactggtaggagaggaatg 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 ggagtggatggacagggggaggaaggagaggtgcaggggaagactggtaggagaggaatg 878
Query: 340 aggaaaaactgagatcagaatgtaaccaaattagttaataattacaataaaaatttcgag 399
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aggaaaaactgaggtcagaatgtaaccaaattagttaataattacaataaaaatttcgag 818
Query: 400 acaacattccgtacttattatggccatgctattagatgtaatttatctcagaagcttatg 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 acaacattccgtacttattatggccatgctattagatgtaatttatctcagaagcttatg 758
Query: 460 tcaataactgggctgtggtttaattttgctcatctttataaggtcgcacttctggaactg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tcaataactgggctgtggtttaattttgctcatctttataaggtcgcacttctggaactg 698
Query: 520 cacctttaggatgccttgaactgtattagctgcttttaatgtctgaacattggtttgaac 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cacctttaggatgccttgaactgtattagctgcttttaatgtctgaacattggtttgaac 638
Query: 580 tttttctcaactagaccaattataaatcttcctgccttgcgttgttgtaaattctttaga 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tttttctcaactagaccaattataaatcttcctgccttgcgttgttgtaaattctttaga 578
Query: 640 tttgaactctctt 652
|||||||||||||
Sbjct: 577 tttgaactctctt 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
