Query= MSMg01no510_i21.b1 MSMg01no510_i21.b1 CHROMAT_FILE:
MSMg01no510_i21.b1 PHD_FILE: MSMg01no510_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:10 2005
(551 letters)
>mm_chr14_70401009_70401958
Length = 950
Score = 1042 bits (539), Expect = 0.0
Identities = 548/551 (99%), Gaps = 1/551 (0%)
Strand = Plus / Minus
Query: 1 atttgtctgtgtgtgggagagggtttgctggagggagggggatggagtcagcgtctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 750 atttgtctgtgtgtgggagagggtttgctggagggagggggatggaggcagcgtctctgc 691
Query: 61 ggcataccagcaaaccagaaattagctccgttcatcacaggcacacggggcttccctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ggcataccagcaaaccagaaattagctccgttcatcacaggcacacggggcttccctcaa 631
Query: 121 ccctcctgtgcactcgcaggagtcgcaagaaggagacagacagaggaagctagagagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ccctcctgtgcactcgcaggagtcgcaagaaggagacagacagaggaagctagagagagg 571
Query: 181 ttggggaggcgggttcccggctggaagggcttccggaatttctgagtgggcaggaaggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttggggaggcgggttcccggctggaagggcttccggaatttctgagtgggcaggaaggat 511
Query: 241 tgcccgattccttgttctcttgggggtttttccggatgctggcagtagagttccactggg 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgcccgattccttg-gctcttgggggtttttccggatgctggcagtagagttccactggg 452
Query: 301 gcatctgtcccagctaggatggccagggtggtctgcgctcactcctgggatggtctctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gcatctgtcccagctaggatggccagggtggtctgcgctcactcctgggatggtctctga 392
Query: 361 tatatgtggaggagacatatactgcagacatggcagctccctctagcctaggcaagctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tatatgtggaggagacatatactgcagacatggcagctccctctagcctaggcaagctac 332
Query: 421 cccctcccctttctattctgcaaaggcatgtggggagcctcaggtgggacagtgatttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cccctcccctttctattctgcaaaggcatgtggggagcctcaggtgggacagtgatttct 272
Query: 481 ctgtaaagtaaaccctaagatgctggttttgagggtcatgcagaggcactttggggttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctgtaaagtaaaccctaagatgctggttttgagggtcatgcagaggcactttggggttac 212
Query: 541 acaggtcccca 551
|||||||||||
Sbjct: 211 acaggtcccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 950
Length adjustment: 10
Effective length of query: 541
Effective length of database: 940
Effective search space: 508540
Effective search space used: 508540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_i21.g1 MSMg01no510_i21.g1 CHROMAT_FILE:
MSMg01no510_i21.g1 PHD_FILE: MSMg01no510_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:10 2005
(587 letters)
>mm_chr14_70249390_70250377
Length = 988
Score = 748 bits (387), Expect = 0.0
Identities = 466/499 (93%), Gaps = 21/499 (4%)
Strand = Plus / Plus
Query: 96 aaaaccaaaaaaaccc---cacaaacaaa-caaacaaaaacaaa-aacaaaacccc-aaa 149
|||||||||||||||| || ||||||| |||||||| |||| || |||||||| |||
Sbjct: 304 aaaaccaaaaaaacccaaaca-aaacaaaacaaacaaa--caaacaa-aaaacccccaaa 359
Query: 150 acaaacaaacaaacaaacaaaaaaactaaataaaaaagaaagaaaaatctattcccaaag 209
||||| |||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 360 acaaa---acaaacaaacaaaa----taaa---aaaagaaagaaaaatctattcccaaag 409
Query: 210 atgtcttcgaaactgcccaaactttgtcaccccaaaagagtgttgcacacgtgcaaaaag 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atgtcttcgaaactgcccaaactttgtcaccccaaaagagtgttgcacacgtgcaaaaag 469
Query: 270 ttaagagaaacaactaatactcctgcagtgttgatttggacaattcatactgctcctccc 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 470 ttaagagaaacaactaatactcctgcagtgttgatttggacaattcatactgctccttcc 529
Query: 330 actctctggaagcacagagaccaagtctaggtggtgggggtgcccacccaccaaagcaca 389
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 actctctggaaggacagagaccaagtctaggtggtgggggtgcccacccaccaaagcaca 589
Query: 390 ccatgtgtggtttaccagctgctctggacccaactacctttctccaaatttgatcctgga 449
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 590 ccatgtgtggtttaccagctgctctggacccaactgcctctctccaaatttgatcctgga 649
Query: 450 gctactgaaagcactggggagcagggggtggaaaa-ggccatgtaggttttgctaggagg 508
|||||||||||||||| |||||||||| ||||||| |||||||| ||| | |||||||||
Sbjct: 650 gctactgaaagcactgaggagcaggggctggaaaaaggccatgtgggtctcgctaggagg 709
Query: 509 ctacccttggcctcctctcaactcctacaggaacccttctgaagatatgattctcaaatt 568
|||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 710 ctacccttggcctcctctcaactcctacaggaacactcctgaagatatgatcctcaaatt 769
Query: 569 acattctccctgggtgtcc 587
|||||||||||||||||||
Sbjct: 770 acattctccctgggtgtcc 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 988
Length adjustment: 10
Effective length of query: 577
Effective length of database: 978
Effective search space: 564306
Effective search space used: 564306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
