Query= MSMg01no510_j12.b1 MSMg01no510_j12.b1 CHROMAT_FILE:
MSMg01no510_j12.b1 PHD_FILE: MSMg01no510_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:13 2005
(627 letters)
>mm_chr14_35663130_35664157
Length = 1028
Score = 1120 bits (579), Expect = 0.0
Identities = 616/633 (97%), Gaps = 12/633 (1%)
Strand = Plus / Plus
Query: 1 ggatgggggaacagcagttcact-cagtctcctactttatggtacttagagcaaagatta 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggatgggggaacagcagttcactgcagtctcctactttatggtacttagagcaaagatta 260
Query: 60 caggtgatacagagaagctaacttggattttaggctgccttgcctctatttcactaaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggtgatacagagaagctaacttggattttaggctgccttgcctctatttcactaaaag 320
Query: 120 taacactaagtagcaccaagctgcagcatatgtgtggatttttatttatttattttgtca 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 taacactaagtagcaccaagctgcagcatatgtgtggatttttatttattt-ttttgtca 379
Query: 180 acttgacaaaagccagagtcatctgttaagagggaacctcaatgaggaagaggttccc-- 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acttgacaaaagccagagtcatctgttaagagggaacctcaatgaggaagaggttcccgc 439
Query: 238 --gtttttattggcctgtaggcaaggctgggggacattttactgactaatgaagatggaa 295
| | ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 aag-----actggcctgtaggcaagactgggggacattttactgactaatgaagatggaa 494
Query: 296 aagggctccccactctgtgggaggtgccgcccc-gagcctgtggtgctgggctctacagg 354
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 495 aagggctccccactctgtgggaggtgccgcccctgagcctgtggtcctgggctctacagg 554
Query: 355 aaagcaggctgagccagattggagagccagccagtagcagcactgctctgtggcctctgc 414
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 555 aaagcaggctgagccagattggagagccagccagtagcagcaccgctctgtggcctctgc 614
Query: 415 ttcagctcctgcctccagattcctgccttgaattcccgttctgacttccttcatgatgga 474
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttcagctcctgcctccatattcctgccttgaattcccgttctgacttccttcatgatgga 674
Query: 475 ccacaactgtaaacggtcggtcgtggtcttttaacatggcaacagaaacctaacacagta 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ccacaactgtaaacggtcggtcgtggtcttttaacatggcaacagaaacctaacacagta 734
Query: 535 tctttagaatcaatttcttttaaaaatatgttcatgttttggggttccattttgctggtt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tctttagaatcaatttcttttaaaaatatgttcatgttttggggttccattttgctggtt 794
Query: 595 gcctgccgggtagaatggggtgttcttttctct 627
|||||||||||||||||||||||||||||||||
Sbjct: 795 gcctgccgggtagaatggggtgttcttttctct 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1028
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1018
Effective search space: 628106
Effective search space used: 628106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_j12.g1 MSMg01no510_j12.g1 CHROMAT_FILE:
MSMg01no510_j12.g1 PHD_FILE: MSMg01no510_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:13 2005
(648 letters)
>mm_chr14_35822043_35823089
Length = 1047
Score = 1098 bits (568), Expect = 0.0
Identities = 628/648 (96%), Gaps = 3/648 (0%)
Strand = Plus / Minus
Query: 1 ggagacactttgaacaaatggtgactacaattcatactagcgtgttttatatttgaaaat 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 912 ggagacactttgaacaaatggtgactacaattcatactagcatgttttatatttgaaaat 853
Query: 61 tgccaaacagataagagcgtgagctagtgacagccttgcatagcgtgatttagaccttgc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tgccaaacagataagagtgtgagctagtgacagccttgcatagcgtgatttagaccttgc 793
Query: 121 ctaacgtacccatacatcatttcatacccctaaacatggacagctttgacctaccccccc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ctaacgtacccatacatcatgtcatacccctaaacatggacagctttgacctaccccccc 733
Query: 181 ccaaaaacaaaacaaaacaccctctctcctggttgcctgggatacagagctctagaatga 240
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 732 cc-aaaacaaaacaaaatgccctctctcctggttgcctgggatacagagctctagaagga 674
Query: 241 -tcattagaagccaagtttgatcaacccacccatacccacacctcacccatcccctaacc 299
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 673 caca-gagaagccaagtttgatcaacccatccatacccacacctcacccatcccctaacc 615
Query: 300 agaggtgcacggaatagtcattccaatccattgccccgcaagctcagtgacctcctgcaa 359
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 614 agaggtgcacggaatagtcattccaatccattgccccacaagctcattgacctcctgcaa 555
Query: 360 cacctctctgagccattttaactctgcaaacaagtgccccaccttgctcaggagagctgg 419
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cacctctctgagccatttttactctgcaaacaagtgccccaccttgctcaggagagctgg 495
Query: 420 gcatgcttccgtgagaggcacacattagagctgccacagcacaaaacagatgttcccgct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 494 gcatgcttccgtgagaggcacacattagagctgccacagcacaaaacagatgtccccgct 435
Query: 480 gtcagctcccttccaaccttctcatcagcataagaaacgcccccagaaaggttctcaaat 539
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 434 gtcggctcccttccaaccttctcatcagcataggaaacgcccccagaaaggttctcaaat 375
Query: 540 gagcaaatcatctcccttgttctagaggctcgtcaggaaaggaggtcccatcctgacaat 599
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 374 gagcaaatcatctcccttgttctagaggctcgtcaggaaaggaggtgccgtcctgacaat 315
Query: 600 cgggtgacacaataggaaactaaaaaggtcggctctaccctctgtgat 647
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cgggtgacacaataggaaactaaaaaggtcggctctaccctctgtgat 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1047
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1037
Effective search space: 661606
Effective search space used: 661606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
