Query= MSMg01no511_g24.b1 MSMg01no511_g24.b1 CHROMAT_FILE:
MSMg01no511_g24.b1 PHD_FILE: MSMg01no511_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:18 2005
(348 letters)
>mm_chr14_15504427_15505174
Length = 748
Score = 572 bits (296), Expect = e-168
Identities = 335/348 (96%)
Strand = Plus / Minus
Query: 1 aaagtctgagttaattacagcaagcattttctcccttcacactgatgtccacagccatct 60
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 548 aaagtctgagttaattacagcaagcattttctcccttcacactgaggcccacagccatct 489
Query: 61 gactgtgaatgaggccaaggtgtgccttcccaggaggaacctctgaaaccagcctcctca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gactgtgaaggaggccaaggtgtgccttcccaggaggaacctctgaaaccagcctcctca 429
Query: 121 cttgcaaacacattactcttagcagttaaaactctgaatgcagaaagggcatgtgagaca 180
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 428 cttgcaaacacattagtcttagcagttaaaactctgaatgcagaaagggcatgtgagata 369
Query: 181 ccaaagtgtggtctctgggctgagcttgttttccatagagctttccaggcacatgacatg 240
|||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 368 ccaaagtgtgatcactgggctgagcttgttttccatagagctttccaggcacgtgacatg 309
Query: 241 ggaatggtttggtgggcacagtgcctttccaacacaatgatggggagtaagtcctgcctg 300
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 308 ggaatggtttggggggcacagtgcctttccaacacaatgatggggactaagtcctgcctg 249
Query: 301 agggcacccaagctgaataacatcccacttgacagtgaccctgcccca 348
|||||||||||||| || | ||||||||||||||||||||||||||||
Sbjct: 248 agggcacccaagctaaagagcatcccacttgacagtgaccctgcccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_g24.g1 MSMg01no511_g24.g1 CHROMAT_FILE:
MSMg01no511_g24.g1 PHD_FILE: MSMg01no511_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:18 2005
(516 letters)
>mm_chr14_15349087_15350002
Length = 916
Score = 888 bits (459), Expect = 0.0
Identities = 500/517 (96%), Gaps = 10/517 (1%)
Strand = Plus / Plus
Query: 1 actgggtggtggtggcgcatgcctttaatcccagcacctgggaggcagaggcaggaggat 60
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 209 actgggtggtggtggcacatgcctttaatcccagcaccggggaggcagaggcaggaggat 268
Query: 61 ttctgagttcaaggccagtctacaaagtgagttccaggacagccagggatattcagagaa 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttctgagttcgaggccagtctacaaagtgagttccaggacagccagggatattcagagaa 328
Query: 121 accctgtctaaaaaataaataaataaataaataaataaataaataaata-aataaataaa 179
||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 329 accctgtct-aaaaataaataaataaataaataaataaataaataaatagaata---aaa 384
Query: 180 taaatagaataaaataaaatttatctaattttgggctggagagatagcttagcagttaag 239
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taa----aataaaataaaatttatctaattttgggctggagagatagcttagcagttaag 440
Query: 240 agcaccaactttttccgaaggtcgtgagttcaaatcccagcaaccacatgctggctcaca 299
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaccaactttttctgaaggttgtgagttcaaatcccagcaaccacatgctggctcaca 500
Query: 300 accatctgtagtgagatctgatgccctcttatgggatgtctgaagacagctacagtgtac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accatctgtagtgagatctgatgccctcttatgggatgtctgaagacagctacagtgtac 560
Query: 360 ttacatataataaataaataaatattaaaaaaaaaacctctccaaacaatgtgctgagcc 419
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 561 ttacatataataaataaataaatat-aaaaaaaaaccctctccaaacaatgtgctgagcc 619
Query: 420 tttcacactcagtgctcgtggagtgggtttcaggaagctccagggaccctggctgcacct 479
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttccacactcagtgctcgtggagtgggtttcaggaagctccagggaccctggctgcacct 679
Query: 480 gtttttgtctcgagtgatgtacgctcaccaactttct 516
|||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtttttgtctcgagtgatgtacgctcaccaactttct 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
