CTATATTTGTGGCCGCTTTACGACTCACTATTCTCGAGAGGATCCGCGGA
ATTCAGGAAATTCTTCTAATGTAGATTAAAAATTGTATAATATGCTGTAC
CTGTGTTTCACATAATTCAAGTACTTAGAGACAAAATAGTGTCTATGCTT
TGTATGATAGTTGGAAATTAACAAAAAATAGTTTAATGTAGAACAGAGTA
GAAGCTGGGAGGCCTTAGATGGAGCATTAGTATAAAATAAACATTGTGCA
TTATAGTTATACAAAACAACATTTCAGGACTGTACAGAAAGGATTGTTTA
GCATCTGTGTACCTTGATAGACATATGACCCTCAAATGTGACAAAAGTAG
GATTGAGTATGTAAGTACACACACAAACTATGCTTTTTTCTTGAGTAGAA
TTCTAGGTAAGACAAATATAGACTTGGGGTCACCCAGCTTCTAATTAAAA
CTTTATCCACTCTAGGATTCTGCCTTTAATTGGTTCAATGTCCATTCTAA
AGAGCTCTAAAGTGTAAGTGTAATCTCATATGAAATTATATGGAAAGGAC
CAAATATTGAACTGTGTACATTCTAAACATGTTTTCTTTTTATCTCTGAT
TTCCCTTTTTATTTCATTATTTTCTTGTCTTTTATTTTTGAGACAGGTTT
TCTTTGTGTACCCCTGGCTGACCCAGAATTCATTCTATAGACTAGGATGG
CCACAAATTTACAGGTCTGCCTCTCTCTGCCATGT

CTATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGCAGAATCCTGGAGGGTGAAAAA
CTCTCAGGACTCTAACAGAGGAACCTTAGCTGAAATACCTGATAGTAGGG
AAAGGAAACTTATAGAGCCCACCTCCAGCAGGAATACAGGACGTCAAGTA
AGGGAGGAATTGCCACCCCACTGTCAAAACTCTGTCCCATAATTGTTCCT
GTCCGAAGAATGGCAGGAATGGAAATCGAGAGGAACATGGGGAAAAAGAG
GTCTACCAATAGGCCCAAAGTGGGATCCAGTTTAAGGGCAGGTCATAAGG
CCTGACACAATTACTGAGACTACAGAGCTCTCACAAAAAGGGACCTATCA
TTACTGCCCTCCAGAAAACCCAACAAGCAGCTGAAAGTGTCATATACAGA
TATTTGCATCCAACCAACTGACAGAAGTTGCTGACCCCTGTGGTTGAATT
AGGGAGTGGCTGAAAGTAGCTGATGAGGAGGGTGACCCTGTAGGACGACC
AGCAATTTCAATTAACCTGGACCACTGAGATCTCTCAAACACTGGACCAC
CAACCTGGCAGCATACACCAGCTTATATAAGGCTCCCAACACATATACAG
CAGAGGTAAGCTGGGTTCTGTGTTCAGCCAGAAGATGTACCTAATCTTCT
AGAGACTGGTAGTCCCACGTAAGTTTAGAGAA

Query= MSMg01no511_n05.b1 MSMg01no511_n05.b1 CHROMAT_FILE:
MSMg01no511_n05.b1 PHD_FILE: MSMg01no511_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:47 2005
         (607 letters)



>mm_chr14_38801369_38802375
          Length = 1007

 Score = 1160 bits (600), Expect = 0.0
 Identities = 606/608 (99%), Gaps = 2/608 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttctaatgtagattaaaaattgtataatatgctgtacctgtgtttcacataattcaagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctaatgtagattaaaaattgtataatatgctgtacctgtgtttcacataattcaagta 260

                                                                       
Query: 61  cttagagacaaaatagtgtctatgctttgtatgatagttggaaattaacaaaaaatagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttagagacaaaatagtgtctatgctttgtatgatagttggaaattaacaaaaaatagtt 320

                                                                       
Query: 121 taatgtagaacagagtagaagctgggaggccttagatggagcattagtataaaataaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatgtagaacagagtagaagctgggaggccttagatggagcattagtataaaataaaca 380

                                                                       
Query: 181 ttgtgcattatagttatacaaaacaacatttcaggactgtacagaaaggattgtttagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtgcattatagttatacaaaacaacatttcaggactgtacagaaaggattgtttagca 440

                                                                       
Query: 241 tctgtgtaccttgatagacatatgaccctcaaatgtgacaaaagtaggattgagtatgta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgtgtaccttgatagacatatgaccctcaaatgtgacaaaagtaggattgagtatgta 500

                                                                       
Query: 301 agtacacacaca-aactatgcttttttcttgagtagaattctaggtaagacaaatataga 359
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtacacacacacaa-tatgcttttttcttgagtagaattctaggtaagacaaatataga 559

                                                                       
Query: 360 cttggggtcacccagcttctaattaaaactttatccactctaggattctgcctttaattg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttggggtcacccagcttctaattaaaactttatccactctaggattctgcctttaattg 619

                                                                       
Query: 420 gttcaatgtccattctaaagagctctaaagtgtaagtgtaatctcatatgaaattatatg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttcaatgtccattctaaagagctctaaagtgtaagtgtaatctcatatgaaattatatg 679

                                                                       
Query: 480 gaaaggaccaaatattgaactgtgtacattctaaacatgttttctttttatctctgattt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaaaggaccaaatattgaactgtgtacattctaaacatgttttctttttatctctgattt 739

                                                                       
Query: 540 ccctttttatttcattattttcttgtcttttatttttgagacaggttttctttgtgtacc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccctttttatttcattattttcttgtcttttatttttgagacaggttttctttgtgtacc 799

                   
Query: 600 cctggctg 607
           ||||||||
Sbjct: 800 cctggctg 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)