Query= MSMg01no513_i03.b1 MSMg01no513_i03.b1 CHROMAT_FILE:
MSMg01no513_i03.b1 PHD_FILE: MSMg01no513_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:01 2005
(712 letters)
>mm_chr14_91080145_91081256
Length = 1112
Score = 1336 bits (691), Expect = 0.0
Identities = 705/711 (99%), Gaps = 6/711 (0%)
Strand = Plus / Minus
Query: 5 gaattctctct--gtaccattcatgtgtagtagatatcttaaatctcttttttgccaaaa 62
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 gaattctctctgagt--cattcatgtgtagtagatatcttaaatctcttttttgccaaaa 855
Query: 63 tgaactatatagttgtttgattataactttgtaaagcaacctcatattttctgatttaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tgaactatatagttgtttgattataactttgtaaagcaacctcatattttctgatttaat 795
Query: 123 tcctaagcaagttaaaaacaagtaaattattatatatctctgtaagtctttaagttataa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tcctaagcaagttaaaaacaagtaaattattatatatctctgtaagtctttaagttataa 735
Query: 183 aagcaagtgtttttgaattgtaacataaaattgtattacatatatgtctaattatggaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aagcaagtgtttttgaattgtaacataaaattgtattacatatatgtctaattatggaaa 675
Query: 243 ctatatactttaaatatttagtactaatattgtaaaggtaaagtttaaaacaaagtcttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctatatactttaaatatttagtactaatattgtaaaggtaaagtttaaaacaaagtcttt 615
Query: 303 gttattttatgcatttctataattcttaattgtgagttaataatgccatatttaaaaaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gttattttatgcatttctataattcttaattgtgagttaataatgccatatttaaaaaga 555
Query: 363 ctttatatgacagcacttacacaataatctcatgtattccatgagtcttctttttattta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ctttatatgacagcacttacacaataatctcatgtattccatgagtcttctttttattta 495
Query: 423 tcaataaagacaaatcatcatttttatgaataagagaaagatttaaataagtcaaaatat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcaataaagacaaatcatcatttttatgaataagagaaagatttaaataagtcaaaatat 435
Query: 483 acatctactatatgaatattgttctttatttcaatgtgacttttgttgaagtatagttta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acatctactatatgaatattgttctttatttcaatgtgacttttgttgaagtatagttta 375
Query: 543 tgttaaactgtggtttttcctctgtgatttcttcacacttaatgaacagagcaataatag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgttaaactgtggtttttcctctgtgatttcttcacacttaatgaacagagcaataatag 315
Query: 603 agtttttgaagagggatttgaaagcaggagaagcgtagcaaagcagttaattctgccaat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agtttttgaagagggatttgaaagcaggagaagcgtagcaaagcagttaattctgccaat 255
Query: 663 tagataaatgttgtggaaagtgaatcttcttac-accctgtggtagtttag 712
|||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 254 tagataaatgttgtggaaagtgaatcttct-accaccctgtggtagtttag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space: 773604
Effective search space used: 773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no513_i03.g1 MSMg01no513_i03.g1 CHROMAT_FILE:
MSMg01no513_i03.g1 PHD_FILE: MSMg01no513_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:02 2005
(558 letters)
>mm_chr14_90903421_90904378
Length = 958
Score = 1079 bits (558), Expect = 0.0
Identities = 558/558 (100%)
Strand = Plus / Plus
Query: 1 aggtgaacacaatgtcactgtattctgaaggaaaaaagaaagtcaaaatacattccaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgaacacaatgtcactgtattctgaaggaaaaaagaaagtcaaaatacattccaact 260
Query: 61 ttaaactaattagaaaaagttcagatcattagttgccatgatatttacaaatgctgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaactaattagaaaaagttcagatcattagttgccatgatatttacaaatgctgtaga 320
Query: 121 ttttaaagcagtgaaatgttagattagagaggtgaatacctctagtgtctataatttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttaaagcagtgaaatgttagattagagaggtgaatacctctagtgtctataatttaaa 380
Query: 181 atgttttattaaccacaagctttgaataaggcatttttttcatgctggtattttgcagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgttttattaaccacaagctttgaataaggcatttttttcatgctggtattttgcagga 440
Query: 241 atcactcatacttctttattataatgaaaaaggtaaaaggtacacatgagcatttatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcactcatacttctttattataatgaaaaaggtaaaaggtacacatgagcatttatgtt 500
Query: 301 aatgtatagcttatatataaactatggagggaacactttgttaaatgaccagatatcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgtatagcttatatataaactatggagggaacactttgttaaatgaccagatatcttt 560
Query: 361 caatcaccatgaaaatatttacatcgccactcaagcacctcctgtttatagatggcctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caatcaccatgaaaatatttacatcgccactcaagcacctcctgtttatagatggcctcc 620
Query: 421 cattttctctagagaaaactgtgaaactaatgacatttagagttatggcagcatcagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattttctctagagaaaactgtgaaactaatgacatttagagttatggcagcatcagctg 680
Query: 481 tcagccttctctataattttctccaggctctgccagacaaatacatttccacatgccata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcagccttctctataattttctccaggctctgccagacaaatacatttccacatgccata 740
Query: 541 aaaaattaagtatcaaaa 558
||||||||||||||||||
Sbjct: 741 aaaaattaagtatcaaaa 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
