XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAA
TATTCATGATTTAGGATGATAAATAGAAACCTGCCCCTGAACTAATCAGG
TTGAGTCCAGTAAGAAAAACTAAAATAAGATCCTGTGCCATTCAAAGTGA
CACATCCCCCCAGTTCTGTTTTGCTGTCATTCCATATAAAGATATAATAA
TTTTCTTGTCAATTTTACTAATTGAGGCTGCTATATCTATTATAAATCTT
TAATCTTCCAGTCTTGAAAGAATCACCAGGAATCACAGAACCATTTTCAC
AGGGAACCCAGAGTGCAAATGCAGAAAGAACCTGCTGTTTCCTCTCTTTT
CCTCTATTTTGCAGAGTCATTACCAGCACATTTTTTCTGTCTCTCTTTTC
TCCCAATGTGTAGGAGGAGGTAGCGGAGATTTCTCCTGTTAAGGACAGCT
CTCAGGTATAAGAATTTATACTAACAGCAACGTGCTCCTTATTTATCGAG
AAAGGCTAGGGCAAACACTATTTCATGAACTTGACTCATTATTACAGAAA
ATATGAATCTGATCTGATCACATCAACCCTTAAGTGCATGCGTTATTAGT
GTTTTACATGAAGAAATGGACCAGATATGGGAAGCTATACTCAAAGATGA
AGGATGCTCACCAGCCTCTGCCATGAAGGATGTGATAAAGGCAGATTTTT
CACAACACTGATAATGCCAGCAAAGACAACTGCTGTGACTTCAGGTGGCT
TACTCAN

TGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAATAACTCACTTAAAGAAATACAGGAGAACACTG
CTAAAGAGTTACAAGTCCTTAAAGAAAAACAGGAAAACACTGCTAAAGAG
TTACAAGTCCTTAAAGAAAAACAGGAAAACACAACCAAACAGGTAGAAGT
CCTTATAGAAAAACAGGAAAACACATCCAAACAGGTGATAGAAATGAACA
AAACCATACTAGACCTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAA
AGTGAGGCGACGCTGGAGATAGAAACCCTAGGAAAGAAATCTGGAACCAT
AGATGCCAGCATCAGCAACAGAATACAAGAGATGGAAGAGAGAATCTCAG
GTGCAGAAGACTCCATAGAGAACATCGGCACAACAATCAAAGAAAATGGA
AAATGCAAAAAGATCCTAAATCAAAACATCCAGGAAATCCAGGACACAAT
GAGAAGACCAAACCTACGGATAATAGGAGTGGATGAGAATGAAGATTTTC
AACTCAAAGGACCAGCAAACATCTAAAACAAAATTATTGAAGAAAACTTC
CCAAATCTAAAGAAAGAGATGCCCATGAACATACAAGAAGCCTACAGAAC
TCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCA
GAACACCAAATGCACTAAATAAAGATAGAATACTAAAAGCAGTAAGGGAA
AAAGGTCAAGTAACATATA

Query= MSMg01no513_n05.b1 MSMg01no513_n05.b1 CHROMAT_FILE:
MSMg01no513_n05.b1 PHD_FILE: MSMg01no513_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:28 2005
         (690 letters)



>mm_chr14_37385485_37386574
          Length = 1090

 Score = 1288 bits (666), Expect = 0.0
 Identities = 681/686 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagaatattcatgatttaggatgataaatagaaacctgcccctgaactaatcagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaatattcatgatttaggatgataaatagaaacctgcccctgaactaatcagg 264

                                                                       
Query: 65  ttgagtccagtaagaaaaactaaaataagatcctgtgccattcaaagtgacacatccccc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgagtccagtaagaaaaactaaaataagatcctgtgccattcaaagtgacacatccccc 324

                                                                       
Query: 125 cagttctgttttgctgtcattccatataaagatataataattttcttgtcaattttacta 184
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 cagttctgttttgctgtcattccatataaagagataataattttcttgtcaattttacta 384

                                                                       
Query: 185 attgaggctgctatatctattataaatctttaatcttccagtcttgaaagaatcaccagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attgaggctgctatatctattataaatctttaatcttccagtcttgaaagaatcaccagg 444

                                                                       
Query: 245 aatcacagaaccattttcacagggaacccagagtgcaaatgcagaaagaacctgctgttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatcacagaaccattttcacagggaacccagagtgcaaatgcagaaagaacctgctgttt 504

                                                                       
Query: 305 cctctcttttcctctattttgcagagtcattaccagcacattttttctgtctctcttttc 364
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 cctctattttcctctattttgcagagccattaccagcacattttttctgtctctcttttc 564

                                                                       
Query: 365 tcccaatgtgtaggaggaggtagcggagatttctcctgttaaggacagctctcaggtata 424
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcccaatgtgtaggaggaggtagaggagatttctcctgttaaggacagctctcaggtata 624

                                                                       
Query: 425 agaatttatactaacagcaacgtgctccttatttatcgagaaaggctagggcaaacacta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaatttatactaacagcaacgtgctccttatttatcgagaaaggctagggcaaacacta 684

                                                                       
Query: 485 tttcatgaacttgactcattattacagaaaatatgaatctgatctgatcacatcaaccct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttcatgaacttgactcattattacagaaaatatgaatctgatctgatcacatcaaccct 744

                                                                       
Query: 545 taagtgcatgcgttattagtgttttacatgaagaaatggaccagatatgggaagctatac 604
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taagtgcatgccttattagtgttttacatgaagaaatggaccagatatgggaagctatac 804

                                                                       
Query: 605 tcaaagatgaaggatgctcaccagcctctgccatgaaggatgtgataaaggcagattttt 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcaaagatgaaggatgctcaccagcctctgccatgaaggatgtgataaaggcagattttt 864

                                     
Query: 665 cacaacactgataatgccagcaaaga 690
           ||||||||||||||||||||||||||
Sbjct: 865 cacaacactgataatgccagcaaaga 890


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)