Query= MSMg01no514_n12.b1 MSMg01no514_n12.b1 CHROMAT_FILE:
MSMg01no514_n12.b1 PHD_FILE: MSMg01no514_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:53 2005
(683 letters)
>mm_chr14_36205545_36206627
Length = 1083
Score = 1294 bits (669), Expect = 0.0
Identities = 678/681 (99%), Gaps = 1/681 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaccactttttt-ttctaatccttttttcaatttcattaattaactcaaatgg 62
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 ggaattccaccacttttttcttctaatccttttttcaatttcattaattaactcaaatgg 1004
Query: 63 tttggcgagtcaaattcatttaaaaacacagaaaaaggatgaagagaatcttcattggtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tttggcgagtcaaattcatttaaaaacacagaaaaaggatgaagagaatcttcattggtc 944
Query: 123 aagagcatgcattgagatggcagagaccttcagttaagttctcaaacccacatcagttat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 aagagcatgcattgagatggcagagaccttcagttaagttctcaaacccacatcagttat 884
Query: 183 atcatgactgccttcaattccatttctaggggatcctcaatgcctctgccctccatggtc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 atcatgactgccttcaattccatttctaggggatcctcaatgcctctgccctccatggtc 824
Query: 243 aactgaaaacacaggcacacagagaaagaaacacggacgcacagtgttcaacaagcatgc 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 823 aactgaaaacacaggcacacagagaaagaaacacggacacacagtgttcaacaagcatgc 764
Query: 303 ttactatatgatcagaaaataaacttcataaagagatgtggaaataggtgaacagaaccc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ttactatatgatcagaaaataaacttcataaagagatgtggaaataggtgaacagaaccc 704
Query: 363 tgaagtcccacatccttttccttttgctggagtttgtagttgtgctagagtatgtagttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgaagtcccacatccttttccttttgctggagtttgtagttgtgctagagtatgtagttg 644
Query: 423 tgctctggtactgcaggctgaaaattgatcagcagttccacaaagccttatgtagcattg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tgctctggtactgcaggctgaaaattgatcagcagttccacaaagccttatgtagcattg 584
Query: 483 cattattgctacattcagcaacacttatgtgggaggaatggaagcaacaaattggaattt 542
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cattattgctacatccagcaacacttatgtgggaggaatggaagcaacaaattggaattt 524
Query: 543 tagggaaatgagaggcatttattctgtaaatctctataggttgacaactgacctcttccc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tagggaaatgagaggcatttattctgtaaatctctataggttgacaactgacctcttccc 464
Query: 603 tgtactggctgcctttgtgtgtccacttgacataagctagagccatcagaaaggaaggag 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgtactggctgcctttgtgtgtccacttgacataagctagagccatcagaaaggaaggag 404
Query: 663 ccacagctgaggaaatagctc 683
|||||||||||||||||||||
Sbjct: 403 ccacagctgaggaaatagctc 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_n12.g1 MSMg01no514_n12.g1 CHROMAT_FILE:
MSMg01no514_n12.g1 PHD_FILE: MSMg01no514_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:53 2005
(597 letters)
>mm_chr14_36044735_36045731
Length = 997
Score = 1069 bits (553), Expect = 0.0
Identities = 586/597 (98%)
Strand = Plus / Plus
Query: 1 tctaggatattgtgtctgttctacttctgcatccctaggagcagagagccccccaggcct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tctaggatattgtgtatgttctacttctgcatccctaggagcagagagccccctgggcct 260
Query: 61 cgtggctgcagatgaaagagaggagaatcttccctccgccattctagcgtccaggccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtggctgcagatgaaagagaggagaatcttccctccgccattctagcgtccaggccagt 320
Query: 121 ggttccaccttttcaaagttcaggaagaaaacattcttatacaatagctggagtttgtgt 180
|||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||
Sbjct: 321 ggttccaccttttcaaagctcaggaaggtaacattcttatacaatagttggagtttgtgt 380
Query: 181 ctcagtgggttttcagggtatggtgtagaaaaacatccaccttttgattttttagctttg 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 ctcagtgggttttcagggtatggtgtagaaaaacatcctccttttgattttttagctttg 440
Query: 241 ctaccaagctgttgtcctctgtcagcttggcacagaccacggatcatctgtacctttccc 300
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ctgccaagctgttgtcctctgtcagcttggcacagaccacggatcatctgcacctttccc 500
Query: 301 ctttctaacttatgtgtacagactgaatatacctaactctcaaaccccaaattctatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttctaacttatgtgtacagactgaatatacctaactctcaaaccccaaattctatatg 560
Query: 361 ttgtaaaatcctaccttttgagagcaccaactatttaataaaatatgtaaaatattctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtaaaatcctaccttttgagagcaccaactatttaataaaatatgtaaaatattctaa 620
Query: 421 atccaaaaaggcccagacatctgaagatcaacagggacactcaactgcgaccactgggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atccaaaaaggcccagacatctgaagatcaacagggacactcaactgcgaccactgggca 680
Query: 481 ttattactcaagagtgtcagaaccccactctacttaatttgtgcaaaaacacatttatag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttattactcaagagtgtcagaaccccactctacttaatttgtgcaaaaacacatttatag 740
Query: 541 acttttgattaatgtccccctttatcatcttttcattaattaggcgaatctgattga 597
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 acttttgattaatgtccccctttatcatcttttcattaattaggtgaatctgattga 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
