Query= MSMg01no516_h14.b1 MSMg01no516_h14.b1 CHROMAT_FILE:
MSMg01no516_h14.b1 PHD_FILE: MSMg01no516_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:13 2005
(689 letters)
>mm_chr14_9436633_9437720
Length = 1088
Score = 1294 bits (669), Expect = 0.0
Identities = 681/685 (99%), Gaps = 1/685 (0%)
Strand = Plus / Minus
Query: 5 gaattcctccttatacaaattactttcatttactgtaatttttatcctttatccatggga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 gaattcctccttatacaaattactttcatttactgtaatttttatcctttatccatggga 829
Query: 65 tttactaattttgaagcttgctcctttgttgggggccatagttctttcctgttctgctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tttactaattttgaagcttgctcctttgttgggggccatagttctttcctgttctgctgt 769
Query: 125 atctgtcctgtgcgttgctaataataaacaaataaatggctcatcctttattctttgcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 atctgtcctgtgcgttgctaataataaacaaataaatggctcatcctttattctttgcca 709
Query: 185 aatgaagttatagatggtaagcattaatttttaaaatacttttcttggccagaaaatttt 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 708 aatgaagttatagatggtaagcattaatttttaaaatacttttgttggccagaaaatttt 649
Query: 245 gctgctatttatgtttacataaactataaaaattaatttgcttccacagttgaaaaataa 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 648 gctgctatttatgtttacataaactataaaaa-taatttgcttccacagttgaaaaataa 590
Query: 305 tcacttataaaatgcaaaataagtcttgtttattttgttgacagtcatgtgcaagtcagg 364
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tcacttgtaaaatgcaaaataagtcttgtttattttgttgacagtcatgtgcaagtcagg 530
Query: 365 cattcccatcacaagcttatgctatagattcatcatggaacagaaattgatatttcacag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cattcccatcacaagcttatgctatagattcatcatggaacagaaattgatatttcacag 470
Query: 425 ttttatgtttcttgagtaaagtggaaatacttagaaaagtgtattaatgaatcttaaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttttatgtttcttgagtaaagtggaaatacttagaaaagtgtattaatgaatcttaaaaa 410
Query: 485 ctttggtcgtgaacttgcagtgtccccattgcacacttcagcaaatctgaatacatctta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctttggtcgtgaacttgcagtgtccccattgcacacttcagcaaatctgaatacatctta 350
Query: 545 agaacaggaaatgaggactgctgtatctagcaaaactctaggaagaatttaaaacggaat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 349 agaacaggaaatgaggactgctgtatctagcaaaactctaggaagaatttaaaacagaat 290
Query: 605 catcattagcaaaattctaaaaatggaacgtttttccttagtacattgacttccttgcta 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 catcattagcaaaattctaaaaatggaacgtttttccttagtacattgacttccttgcta 230
Query: 665 taatgtgtgtgtttgctctccttgt 689
|||||||||||||||||||||||||
Sbjct: 229 taatgtgtgtgtttgctctccttgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1088
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1078
Effective search space: 731962
Effective search space used: 731962
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_h14.g1 MSMg01no516_h14.g1 CHROMAT_FILE:
MSMg01no516_h14.g1 PHD_FILE: MSMg01no516_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:13 2005
(606 letters)
>mm_chr14_9266821_9267826
Length = 1006
Score = 1156 bits (598), Expect = 0.0
Identities = 604/606 (99%)
Strand = Plus / Plus
Query: 1 aataggctcagtgatgggggcattagccctgcctgccttaagatgaggagggccataggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataggctcagtgatgggggcattagccctgcctgccttaagatgaggagggccataggc 260
Query: 61 atgagcagtctagaggacttggtgggctccaggaggaggccagagggctttggagaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagcagtctagaggacttggtgggctccaggaggaggccagagggctttggagaagcc 320
Query: 121 cattttggctcagaacaaggaggaattttcttagcattagaactgaccagtaagtggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattttggctcagaacaaggaggaattttcttagcattagaactgaccagtaagtggaaa 380
Query: 181 tgtcttctagggagggcaaaggctagggaaatagttgtataggattttgtcgatgcatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcttctagggagggcaaaggctagggaaatagttgtataggattttgtcgatgcatct 440
Query: 241 acatgctgcagaggtccagattcagagaccctacgatgagttcctatgaccttagcatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatgctgcagaggtccagattcagagaccctacgatgagttcctatgaccttagcatcc 500
Query: 301 cagggtttacatccttcaagtgttatggactctgtcaccaaccacattggattaacagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagggtttacatccttcaagtgttatggactctgtcaccaaccacattggattaacagca 560
Query: 361 gtagccaacatggctacttggcacaatttttagtgaacagatcgcagaaagacttttgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtagccaacatggctacttggcacaatttttagtgaacagatcgcagaaagacttttgct 620
Query: 421 ttccttttatttcttttgttgcctcaagaatggcctctgaggctctgcttttgttctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccttttatttcttttgttgcctcaagaatggcctctgaggctctgcttttgttctgtt 680
Query: 481 ctgtttttttccccttgtggagatgctgactgttgctttccaaaggatgtgacttaacta 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 ctgtttttttccccttgtggagatgctgactgttgctttccaaagggtgtgacttaacta 740
Query: 541 tacccaacaaagcagccactaaaggttaacaaggggttaacctgcttctccagaagagct 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 tacccaacaaagcagccactaaaggttaacaaggggtaaacctgcttctccagaagagct 800
Query: 601 tctcca 606
||||||
Sbjct: 801 tctcca 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
