Query= MSMg01no516_p02.b1 MSMg01no516_p02.b1 CHROMAT_FILE:
MSMg01no516_p02.b1 PHD_FILE: MSMg01no516_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:52 2005
(660 letters)
>mm_chr14_115694952_115696011
Length = 1060
Score = 1145 bits (592), Expect = 0.0
Identities = 637/652 (97%), Gaps = 2/652 (0%)
Strand = Plus / Plus
Query: 10 ctgctgctaaattgagaatatgttcttagtttttccaaactgtattagaagttgccatag 69
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 210 ctgctgctaaattgagaatatgttcttagttttgccaaactgtattagaagttgccatag 269
Query: 70 tctcacacaggtaagagtcacttctcatatttacattccattgccagaaagagagttaac 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tctcacacaggtaagagtcacttctcatatttacattccattgccagaaagagagttaac 329
Query: 130 tggtccatagctctttgtggaaactgtctttgttttttctcagtgaatcattcagacctg 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tggtccatagctctttgtggaaactgtctttgttttttctcagtgaatcattcagacctg 389
Query: 190 cagtgaggaacaccacaatttaataggagaaaagcttagaacctgtgagt-ggagtacac 248
|||||||||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 390 cagtgaggaacaccacaatttaataggagaaaagcttagaacctgtgaatagg-gtacat 448
Query: 249 acacttgtcaaagttatagcatggaaagaatggggcaacggtctttagtgaattcatgaa 308
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acacttgtcaaagttgtagcgtggaaagaatggggcaacggtctttagtgaattcatgaa 508
Query: 309 atgcctgtgggcttccactttgaagtttgtccacaacagactgagtagttacagtgtact 368
|||||||||||||||| |||||| ||||||||||||||||| | |||||||||||| |||
Sbjct: 509 atgcctgtgggcttccgctttgaggtttgtccacaacagaccgggtagttacagtgcact 568
Query: 369 ttgtttttccatctgtcttatgctcagtagcgtgtatttatacatgtgccttaatgtaag 428
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttgcttttccatctgtcttatgctcagtagcgtgtatttatacatgtgccttaatgtaag 628
Query: 429 cacaaatgtgtacacttaattttctcagttttcacatatggctaccaaatctatcattga 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cacaaatgtgtacacttaattttctcagttttcacatatggctaccaaatctatcattga 688
Query: 489 gccccatatgacctacttacagaggtctcagtcattgagttaatgttatgaatgctgttg 548
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 689 gccccatatgacctacttacagaggtctcagtcattgagttaatgttgtgaatgctgttg 748
Query: 549 ttggaagaactaacggaaaggtcagatgtaatatggataactggcaggatgcttgtgcct 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ttggaagaactaacggaaaggtcagatgtaatatggataactggcaggatgcttgtgcct 808
Query: 609 gtacaacagcgaaccactgattgttcctatgctgttagtgctgcgtttggag 660
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 809 gtacaacagcgaaccactgatttttcctatgctgttagtgctgcgtttggag 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_p02.g1 MSMg01no516_p02.g1 CHROMAT_FILE:
MSMg01no516_p02.g1 PHD_FILE: MSMg01no516_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:52 2005
(656 letters)
>mm_chr14_115810260_115811311
Length = 1052
Score = 1083 bits (560), Expect = 0.0
Identities = 629/654 (96%), Gaps = 4/654 (0%)
Strand = Plus / Minus
Query: 1 actggtaccatgtctgtctcatctatcagctatacacccacaacccatgttccaatcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 actggtaccatgtctgtctcatctatcagctatacacccacaacccatgttccaatcaga 791
Query: 61 tcaatgaggacaattctgaccttgccagtgaagtatagtagtcagaaagtttcatatggt 120
||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct: 790 tcaatgaggacaattctgaccttgccagtgaagtataatagccagaaagtttcagatggt 731
Query: 121 taatcagagaatattgctcggagggaaggagtgcaggagttcttagaattgaatgtatcc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 730 taatcagagaatattgctcggagggaaggagtgcgggagttcttagaattgaatgtagcc 671
Query: 181 ctgttagtcacagtagcctaccccatcacgtgggaagccaaggaatgatgaatttacatc 240
||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 670 ctgttagtcacggtagcctatcccatcacgtgggaagcggaggaatgatgaatttacatc 611
Query: 241 tcaggctatcctaagcttcatgaccaaatcctctcttgaacaaattggagtcatttgtgt 300
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 610 tcaggctatcctaagcttcatgacaaaatcctctcttgaacaaattggagtcatttgtgc 551
Query: 301 cagcccttcaaaaagtagctagaagccacacagaaatgactcttacccacagcaatctga 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cagcacttcaaaaagtagctagaagccacacagaaatgactcttacccacagcaatctga 491
Query: 361 aaccgtgttcaaaccttggctccttcttatattctgtgtcttatatttgtttcagataca 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aactgtgttcaaaccttggctccttcttatattctgtgtcttatatttgtttcagataca 431
Query: 421 ggcatatcaccccttaagattgaggtgttgcagccagtggcagggaccataaatggcctg 480
|||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 430 ggcatatcaccccttaagattgaggtgttgcagccaaaggcagggaccgtaaatgtcctg 371
Query: 481 cttggcaggattgatgacagactaaagagacacttgtgctcttcttggcactcagaggtt 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cttggcaggattgacgacagactaaagagacacttgtgctcttcttggcactcagaggtt 311
Query: 541 taaaacaagggacccccccccctgaagttatcatttcccccagggattttctgttggaaa 600
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 310 taaaacaaggga----cccccctgaagttatcatttcccccagggattttcagttggaaa 255
Query: 601 aagaaaaggatgaagctaagttcttgagttggggtctctcactgaacattatga 654
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 254 aagaaaaggatgaagctaatttcttgagttggggtctctcactgaacatgatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1052
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1042
Effective search space: 673132
Effective search space used: 673132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
