Query= MSMg01no517_c14.b1 MSMg01no517_c14.b1 CHROMAT_FILE:
MSMg01no517_c14.b1 PHD_FILE: MSMg01no517_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:09 2005
(688 letters)
>mm_chr14_63364980_63366068
Length = 1089
Score = 1265 bits (654), Expect = 0.0
Identities = 678/686 (98%), Gaps = 2/686 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagactagcctagcaatatagtaagatccctatctcaaaaaaggagagaaattc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagactagcctagcaatatagtaagatccctatctcaaaaaaggagagaaattc 264
Query: 65 aaagacatttaaactctctattgtaggtagcaaaaattgaatgaagtttactggatctga 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagacatttaaactctctactgtaggtagcaaaaattgaatgaagtttactggatctga 324
Query: 125 catataccagcatatgatgaagtttagtgatataaaaatcagttggagatcttagtaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catataccagcatatgatgaagtttagtgatataaaaatcagttggagatcttagtaaaa 384
Query: 185 tatagttgttcattcagtgttttcaacaagtttgggagatgctaatgtccacagaccacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatagttgttcattcagtgttttcaacaagtttgggagatgctaatgtccacagaccacc 444
Query: 245 tccagtagtaaggaaaagggttatatgcataaatcatctgcaggggttttttgttttccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccagtagtaaggaaaagggttatatgcataaatcatctgcaggggttttttgttttccc 504
Query: 305 ttctcatttactaatctcgattcctggcatattatagcacatactattgactgaataaaa 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctcatttactaatcttgattcctggcatattatagcacatactattgactgaataaaa 564
Query: 365 tttacagttacagtaattatatgattagaatctaatcattataaaggagggagatctgct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttacagttacagtaattatatgattagaatctaatcattataaaggagggagatctgct 624
Query: 425 aagcattttgatcaagtcaggcaaacttgtaagtagacgtttctcaaattgacgcctaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagcattttgatcaagtcaggcaaacttgtaagtagacgtttctcaaattgacgcctaaa 684
Query: 485 agaagttctaaaaagtggaatcttctgctggttagaacac-acctttgcacagttctcgt 543
||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 685 agaagttctaaaaagtgaaatcttctgttggttagaacaccacctttgcacagttctcgt 744
Query: 544 atgcacataaaaaa-gccagtaagtagtgtttacatctctaagtccaacactgaggaggc 602
|||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 745 atgcacataaaaaaagctagtaagtagtgtttacatctgtaagtccaacactgaggaggc 804
Query: 603 aaaaacaagatgattccttgggcttgctgggcaaataatcaagcggaataggtgagctct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaaaacaagatgattccttgggcttgctgggcaaataatcaagcggaataggtgagctct 864
Query: 663 gagagtactgagcgactctgttccaa 688
||||||||||||||||||||||||||
Sbjct: 865 gagagtactgagcgactctgttccaa 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1089
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1079
Effective search space: 731562
Effective search space used: 731562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_c14.g1 MSMg01no517_c14.g1 CHROMAT_FILE:
MSMg01no517_c14.g1 PHD_FILE: MSMg01no517_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:09 2005
(647 letters)
>mm_chr14_63502741_63503787
Length = 1047
Score = 1100 bits (569), Expect = 0.0
Identities = 572/573 (99%)
Strand = Plus / Minus
Query: 1 actcactaactcccaacatctaggctccagtctggcaggtagtcctggcaaatggcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 actcactaactcccaacatctaggctccagtctggcaggtagtcctggcaaatggcttgt 514
Query: 61 ttactttaggaagtagcctgctggagctggggtggaaacgtgtcctctacaatctgaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttactttaggaagtagcctgctggagctggggtggaaacgtgtcctctacaatctgaagg 454
Query: 121 cctgttctgatctacctgcctgttcagtgagtggccagaacacaggctgcacattaacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cctgttctgatctacctgcctgttcagtgagtggccagaacacaggctgcacattaacgt 394
Query: 181 gaccctttcagggatgaaggacttcccaagcagattcttccaagagaaatgactggcata 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 393 gaccctttcagggatgaaggacttcccaagcagattcttccaacagaaatgactggcata 334
Query: 241 gaaacattcctgttctttattggaccccgattgttggctgagctcagagacagtaggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaaacattcctgttctttattggaccccgattgttggctgagctcagagacagtaggaaa 274
Query: 301 gagctttcaatgatcagacacaggaaaaacagtcctcaaagaaccacaaaataagtaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gagctttcaatgatcagacacaggaaaaacagtcctcaaagaaccacaaaataagtaaga 214
Query: 361 cagttatattccagagaatctgacttccagaattactgtattcttatctgttctccacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 cagttatattccagagaatctgacttccagaattactgtattcttatctgttctccacag 154
Query: 421 taaactgtagagtacacatgaaacagaaagtatggatcatcttgggggcctggaacaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 taaactgtagagtacacatgaaacagaaagtatggatcatcttgggggcctggaacaaaa 94
Query: 481 ctgacagaaactgcccaggaagaggtgtaatgttggtcttactgtagactgtctggaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ctgacagaaactgcccaggaagaggtgtaatgttggtcttactgtagactgtctggaata 34
Query: 541 tgcttaatactagaatgagaatgtcagaatgga 573
|||||||||||||||||||||||||||||||||
Sbjct: 33 tgcttaatactagaatgagaatgtcagaatgga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
