Query= MSMg01no517_h20.b1 MSMg01no517_h20.b1 CHROMAT_FILE:
MSMg01no517_h20.b1 PHD_FILE: MSMg01no517_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:36 2005
(672 letters)
>mm_chr14_120491993_120493064
Length = 1072
Score = 1247 bits (645), Expect = 0.0
Identities = 663/669 (99%)
Strand = Plus / Plus
Query: 4 ggaattcaatgagatgcagcaagaacactgggaggtagagaagagggccagcatgtgagc 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatgagaggcagcaagaacactgggaggtagagaagagggccagcatgtgagc 263
Query: 64 aggatgagtctgtggtagagaactggcaaaaacaaagtatgtataagactgtcaggatga 123
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 aggatgagtctgtgggagagaactggcaaaaacaaagtatgtataagactatcaggatga 323
Query: 124 aagtcattggtttccatgctaattttaagaataatagcagtgactatgacaacagtaaaa 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagtaattggtttccatgctaattttaagaataatagcagtgactatgacaacagtaaaa 383
Query: 184 agcaacacactgatccagtgttgaaagtgggagtgatgggcagggtgacatggccataaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcaacacactgatccagtgttgaaagtgggagtgatgggcagggtgacatggccataaa 443
Query: 244 gtgataaggtcaggccacgggctgtcgaggtcatagtaaaaatgatcagattttattgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgataaggtcaggccacgggctgtcgaggtcatagtaaaaatgatcagattttattgta 503
Query: 304 tgtaagacagatatagagacaagtgtgatggtttgtatatgcttggccctgggaggggca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtaagacagatatagagacaagtgtgatggtttgtatatgcttggccctgggaggggca 563
Query: 364 ctgttagaacatacaacagggagtgtccctgttggcataggcgtgtcactttgggtatgg 423
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 564 ctgttagaacatacaacagggagtgtccctgttggcataggtgtgtcactttgggtatgg 623
Query: 424 gctttgaaaccctcatcctaactgcctggaagtcagtattctgctagcagtcttcagttg 483
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctttgaaacccttatcctaactgcctggaagtcagtattctgctagcagtcttcagttg 683
Query: 484 aagatgtagaactctcagctcctcctgcaccatgcctaccaggatgctgccatgcttccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagatgtagaactctcagctcctcctgcaccatgcctaccaggatgctgccatgcttccc 743
Query: 544 accttgatgataatggactgaactgaacctctgaacctgtaagccagccccaattagatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 accttgatgataatggactgaactgaacctctgaacctgtaagccagccccaattagatg 803
Query: 604 ttgtccttataagagttgcactggtaatggtgtctgttcatagcagtaacaccctaagac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgtccttataagagttgcactggtaatggtgtctgttcatagcagtaacaccctaagac 863
Query: 664 aatgagtta 672
|||||||||
Sbjct: 864 aatgagtta 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_h20.g1 MSMg01no517_h20.g1 CHROMAT_FILE:
MSMg01no517_h20.g1 PHD_FILE: MSMg01no517_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:36 2005
(599 letters)
>mm_chr14_120667679_120668677
Length = 999
Score = 1013 bits (524), Expect = 0.0
Identities = 536/546 (98%), Gaps = 10/546 (1%)
Strand = Plus / Minus
Query: 64 acctcaatctccatcagatgggcaaggctgtggacatgttttctggattaatgatagatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 acctcaatctccatcagatgggcaaggctgtggacatgttttctggattaatgatagatg 940
Query: 124 taggagaggcaggtccactgtgggtggcgacatctctgggcaggtggtcctgggctgtat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 taggagaggcaggtccactgtgggtggcgacatctctgggcaggtggtcctgggctgtat 880
Query: 184 gaaagaaagcagactaagcaagccagtaattgccattcctccatggtgttggcttcagct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gaaagaaagcagactaagcaagccagtaattgccattcctccatggtgttggcttcagct 820
Query: 244 cctccctccatgatgcggtcttagcttctcctcatgatgagctgccgtgaggcgtagaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 cctccctccatgatgcggtcttagcttctcctcatgatgagctgccgtgaggcgtagaac 760
Query: 304 cctgtaggccctttcttccacaggtt----------ttttttttttttatcacagcaaca 353
|||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 759 cctgtaggccctttcttccacaggttgtttttttttttttttttttttatcacagcaaca 700
Query: 354 gaaaccctggctaagacagagaaaaagatcaaggttttctgtgagtgaaaaatgtcaggc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gaaaccctggctaagacagagaaaaagatcaaggttttctgtgagtgaaaaatgtcaggc 640
Query: 414 aattgaggacacatggaaatacttgttttccataccagaagagaagccaggaaataagtg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aattgaggacacatggaaatacttgttttccataccagaagagaagccaggaaataagtg 580
Query: 474 atggtcattgtcttagtagggtttttacaactgtgaacagacaccacaaccaaggcagct 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atggtcattgtcttagtagggtttttacaactgtgaacagacaccacaaccaaggcagct 520
Query: 534 cttataaggacaacatctaactgggactggaggttcagtccagtatcatcaaggcaagag 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cttataaggacaacatctaactgggactggaggttcagtccagtatcatcaaggcaagag 460
Query: 594 catggc 599
||||||
Sbjct: 459 catggc 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
