Query= MSMg01no517_l10.b1 MSMg01no517_l10.b1 CHROMAT_FILE:
MSMg01no517_l10.b1 PHD_FILE: MSMg01no517_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:53 2005
(429 letters)
>mm_chr14_72257717_72258545
Length = 829
Score = 808 bits (418), Expect = 0.0
Identities = 421/422 (99%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 5 gaattctctctgctctttgcatttca-aaataggaaggcagggaaaatgggaaggagaaa 63
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctctctgctctttgcatttcacaaataggaaggcagggaaaatgggaaggagaaa 263
Query: 64 ggaagaaagcatcaggaggagggagggaaggaaagagggagcaagacatggagaaacaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggaagaaagcatcaggaggagggagggaaggaaagagggagcaagacatggagaaacaga 323
Query: 124 aaagaaaagagcaaagaaattgtcagttctaatgtatacacattcaacaatattccaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaagaaaagagcaaagaaattgtcagttctaatgtatacacattcaacaatattccaata 383
Query: 184 attctcatcagtataaatatatataatttaggttgataaccacagttttcctatttcccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attctcatcagtataaatatatataatttaggttgataaccacagttttcctatttcccc 443
Query: 244 tcctcttcatacatttagttggaaaagtagtaattgatggacctagggtttaatgtgacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcctcttcatacatttagttggaaaagtagtaattgatggacctagggtttaatgtgacc 503
Query: 304 ctgacagtttctaaactttatattgtttctactgtctttccagatcttcaaatagtttaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgacagtttctaaactttatattgtttctactgtctttccagatcttcaaatagtttaa 563
Query: 364 gcttgacaactggttagatgtgggtagtggggtgtggggccgtgggtgtgtgggaagagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcttgacaactggttagatgtgggtagtggggtgtggggccgtgggtgtgtgggaagagg 623
Query: 424 gg 425
||
Sbjct: 624 gg 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_l10.g1 MSMg01no517_l10.g1 CHROMAT_FILE:
MSMg01no517_l10.g1 PHD_FILE: MSMg01no517_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:54 2005
(659 letters)
>mm_chr14_72411529_72412587
Length = 1059
Score = 223 bits (115), Expect = 5e-62
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 541 ttcctgcctgatttcttcctgtccctattgttttctgattcctggctgcccacctggaaa 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ttcctgcctgattccttcctgtccctattgttttctgattcctggctgcccacctggaaa 800
Query: 601 tctgttctactgtatcacaccatccctgccataatgagttgaatcctctgaaatcatga 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tctgttctactgtatcacaccatccctgccataatgagttgaatcctctgaaatcatga 741
Score = 168 bits (87), Expect = 1e-45
Identities = 87/87 (100%)
Strand = Plus / Minus
Query: 1 ctgatttgtcaggcttggatggcctaggatgaggccacctaagtgtgcacagaatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 ctgatttgtcaggcttggatggcctaggatgaggccacctaagtgtgcacagaatccagc 888
Query: 61 ccttgcctctgagtgggactgagtata 87
|||||||||||||||||||||||||||
Sbjct: 887 ccttgcctctgagtgggactgagtata 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
