Query= MSMg01no517_p18.b1 MSMg01no517_p18.b1 CHROMAT_FILE:
MSMg01no517_p18.b1 PHD_FILE: MSMg01no517_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:15 2005
(674 letters)
>mm_chr14_75685153_75686226
Length = 1074
Score = 1203 bits (622), Expect = 0.0
Identities = 650/670 (97%), Gaps = 19/670 (2%)
Strand = Plus / Minus
Query: 11 gaattcccttatcctaaatgtttaaaaccaggtatattttggattcaaatcctgttaagc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 gaattcccttatcctaaatgtttaaaaccaggtatattttggattcaaatcctgttaagc 959
Query: 71 taaatatatgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtataagtaatatatacatat 130
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 taaatata------------tgtgtgtgtgtgtgtatatgtataagtaatatatacatat 911
Query: 131 aatacatatatgtatctttaaaaaagaccaagatttaaattcaaaatttatgcttagtac 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 910 aatacatatatgtatctttaaaaaagaccaagatttaaattcaaaatttatgcttaatac 851
Query: 191 aatataaattaacactaatgacttaatataatgtattgatataaaagtcatactgtgctt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 aatataaattaacactaatgacttaatataatgtattgatataaaagtcatactgtgctt 791
Query: 251 tagtattctaaatttatattacagacattaaactgaggtaagtgtctccagtctagacat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tagtattctaaatttatattacagacattaaactgaggtaagtgtctccagtctagacat 731
Query: 311 taatcaggcccaatccagataagcttctgagatcaggtgttcagggtgatacggcctgct 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 taatcaggcccaatccagataagcttctgagatcaggtgttcagggtgatacggcctgct 671
Query: 371 gagaacagagaatatactcagaataaaggttagtgttcactccaagtcaccagtaaacag 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gagaacagagaatatactcagaataaaggttagtgttcactccaagtcaccagtaaacag 611
Query: 431 aaagcaaataaagaagctgtatccctggattgaacatatccagg------aaaacaaaaa 484
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 610 aaagcaaataaagaagctgtatccctggattgaacatatccaggaaaacaaaaacaaaaa 551
Query: 485 caaagcaacacaaaacaacaacaaaaaacccaaaaaccaaaactacactgtgtacaaacc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 caaagcaacacaaaacaacaacaaaaaacccaaaaaccaaaactacactgtgtacaaacc 491
Query: 545 ttatttacattatttaaaattagcataaaagtacttttataggatttacattgcactatg 604
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 490 ttatttacattatttaaaattagcat-aaagtacttttataggatttacattgcactatg 432
Query: 605 tattagaagtatagagatgattgaaggcatataaaacatcgttttccagaagggatttga 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tattagaagtatagagatgattgaaggcatataaaacatcgttttccagaagggatttga 372
Query: 665 gtttctgcac 674
||||||||||
Sbjct: 371 gtttctgcac 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_p18.g1 MSMg01no517_p18.g1 CHROMAT_FILE:
MSMg01no517_p18.g1 PHD_FILE: MSMg01no517_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:15 2005
(671 letters)
>mm_chr14_75540716_75541786
Length = 1071
Score = 1230 bits (636), Expect = 0.0
Identities = 663/672 (98%), Gaps = 2/672 (0%)
Strand = Plus / Plus
Query: 1 ttggccctttgatgtttggaaactagaatttgataagttaatacatctcaaaaaggtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggccctttgatgtttggaaactagaatttgataagttaatacatctcaaaaaggtttt 260
Query: 61 tatctgctgcccacagggtgttaggtctagttttatatgtcagtcacaggatgttgggtc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tatctgctgcccacagggtgttaggtccagttttatatgtcagtcacaggatgttgggtc 320
Query: 121 caccagagaagttggcaaggaatggttttgtaagggtctgaagacagtcagagagaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccagagaagttggcaaggaatggttttgtaagggtctgaagacagtcagagagaaact 380
Query: 181 acagttagcatctggacctgcaacacaccaacctctccgagtcaccgcagtcctaatcgg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 acagttagcatctggacctgcaacataccaacctctccgagtcaccgcagtcctaatcgg 440
Query: 241 tcccttggcctttgcagacatagctccttccttccttccaggtttctccttcatctcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccttggcctttgcagacatagctccttccttccttccaggtttctccttcatctcccc 500
Query: 301 ctgttaggcaagtgtcatattttacacatgtggggataggcacaagtgttatttgacata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgttaggcaagtgtcatattttacacatgtggggataggcacaagtgttatttgacata 560
Query: 361 gctagagagtctcattcctaggatctggtgtacatgagtctgagctgtaggcggggcaga 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctagagagtctcattc-taggatctggtgtacatgagtctgagctgtaggcggggcaga 619
Query: 421 agccttcaggagagtgggatagttggtaaagccagtaagaagaaacttctagtttgtatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agccttcaggagagtgggatagttggtaaagccagtaagaagaaacttctagtttgtatc 679
Query: 481 aaatatcttagccatcattatccagatttgattttttttt-ctgtttgtcttctgtatct 539
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 680 aaatatcttagccatcattatccagatttgattttttttttctgtttgtcttctgtatct 739
Query: 540 ggcatagcattcatatgtggcatatagggtcctgcctagttttatgtcaactagacacaa 599
|||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 740 ggcataacattcatatgtggcatatacggtcctgcctagttttatgtcaagtagacacaa 799
Query: 600 actagagtcatttttgaaggaggaacttcagttgagaaaatatacccaccatactgacct 659
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 800 actagagtcatttttgaaggaggaacttcagttgagaaaatatccccaccatactgacct 859
Query: 660 gtaggcaagtct 671
|||| |||||||
Sbjct: 860 gtagtcaagtct 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
