Query= MSMg01no518_b07.b1 MSMg01no518_b07.b1 CHROMAT_FILE:
MSMg01no518_b07.b1 PHD_FILE: MSMg01no518_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:23 2005
(672 letters)
>mm_chr14_119888612_119889683
Length = 1072
Score = 1268 bits (656), Expect = 0.0
Identities = 662/664 (99%)
Strand = Plus / Minus
Query: 9 tcttcagagatgaatgctactgacatttgcaaagagtaagaagtcatgacatcataactg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tcttcagagatgaatgctactgacatttgcaaagagtaagaagtcatgacatcataactg 813
Query: 69 agtgtcccccagtgagctcactgtgaagtgtttctcatcgttgagacaggttggaggctt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 agtgtcccccagtgagctcactgtgaagtgtttctcatcgttgagacaggttggaggctt 753
Query: 129 ctaataacattcatctgttcttctgactgtcaaaggaatttactgggcgtttacacaagc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ctaataacattcatctgttcttctgactgtcaaaggaatttactgggcgtttacacaagc 693
Query: 189 aagaaagaaaaattagaaaagagaccagtcttcactcttcttaacacaaagactatcccc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aagaaagaaaaattagaaaagagaccagtcttcactcttcttaacacaaagactatcccc 633
Query: 249 tgtagggcttccgggccaacagaagttcccctaaaataatttaagcaccttttcatcaaa 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgtagggcttccgggccaacagaagttcccctaaaataatttaagcaccttttcatcaaa 573
Query: 309 catattgaaccatcaataacaggtcctctttttcccttacatatcatgaactgactgaag 368
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aatattgaaccatcaataacaggtcctctttttcccttacatatcatgaactgactgaag 513
Query: 369 caagaatgatactgaatgagacaaggcaaaggtttaatccataataataaatcagtcctt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caagaatgatactgaatgagacaaggcaaaggtttaatccataataataaatcagtcctt 453
Query: 429 gtattcaaatctctcttcctttatcaaaagtggtttggatggtttttataaaccttgttt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtattcaaatctctcttcctttatcaaaagtggtttggatggtttttataaaccttgttt 393
Query: 489 gtgatcatattttttttcacacccaacagacagtcatgaagaatcacagttgtccaatca 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtgatcatattttttttcacacccaacagacagtcatgaagaatcacagttgtccaatca 333
Query: 549 tctgaatgtcattttaaacattaagcatcccctgtgttcaatgatgaaatagcccttctg 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tctgaatgtcattttaaacattaagcatcccctgtgttcaatgatgaaatagcccttctg 273
Query: 609 gtttgaagacagagcggagtctgagggagagagactagaaagaagaaagtattacttttt 668
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gtttgaagacagagcggagtcagagggagagagactagaaagaagaaagtattacttttt 213
Query: 669 actt 672
||||
Sbjct: 212 actt 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_b07.g1 MSMg01no518_b07.g1 CHROMAT_FILE:
MSMg01no518_b07.g1 PHD_FILE: MSMg01no518_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:23 2005
(556 letters)
>mm_chr14_119722647_119723602
Length = 956
Score = 886 bits (458), Expect = 0.0
Identities = 517/566 (91%), Gaps = 48/566 (8%)
Strand = Plus / Plus
Query: 1 tgggctattgttatggcatataggattaatgataggctacaatagcattgcatattaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggctattgttatggcatataggattaatgataggctacaatagcattgcatattaaaa 260
Query: 61 gaatagcctgagagctacagaatcactcaagctccgaagtcaagtgtggatggatcactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatagcctgagagctacagaatcactcaagctccgaagtcaagtgtggatggatcactg 320
Query: 121 gatgcttttatttctagtattttgtttatcaggcagtgttgccttgccagaaagcagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgcttttatttctagtattttgtttatcaggcagtgttgccttgccagaaagcagaga 380
Query: 181 tgctgttgggaaccaggtacataactgtccagctgtgatgttctctctctctctctctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctgttgggaaccaggtacataactgtccagctgtgatgttctctctctctctctctct 440
Query: 241 ctctctctctctctctctctctctctctctctctctctctctctttccctctctcctctc 300
|||||||||| ||||||||||||||||
Sbjct: 441 ctctctctct----------------------------------ttccctctctcctctc 466
Query: 301 tctgtctatgtctctctgtatctttctctctctgtctctct----------gtctctctt 350
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 467 tctgtctatgtctctctgtatctttctctctctgtctctctctgtctctctgtctctctt 526
Query: 351 tctctctcaccttctctcctctctctgtctatgtctctctgtgtctttctctctctcttt 410
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tctctctcaccttctct--tctctctgtctatgtctctctgtgtctttctctctctcttt 584
Query: 411 cctctctctgtctctctctgcctctgtctctctctctctgggtgttcacttcaggttttt 470
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 585 cctctctctgtctctctctgcctctgtctctctctct--gggtgttcacttcaggttttt 642
Query: 471 catttcaccatatataatatagatactataagtgatatatttaaatcgaactgtttcaat 530
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 643 catttcaccatatataatatagatactataaatgatatatttaaatcgaactgtttcaat 702
Query: 531 tcagcattattcagttttatataaca 556
||||||||||||||||||||||||||
Sbjct: 703 tcagcattattcagttttatataaca 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
