XXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCTTCCA
GTATTCAGCAAGGGGCAGTGCTAGAATAATATGTTTAGAACTCAAAGCAT
CATCTACATAGTCATTTAAATTATGTTAATTACACTATCATAAGCATTTG
TCAAACAATAGGAAAATGCCTATGTAATTAATGTCTTTCTTGCATCAATT
TAGTCTTTAATTTTTTATAATGAATAACAAATTTTAAAACATTTGCTCAT
AATGCCAGCTATTCCCTTGAGCTTATTACTTGATGAAAGACAACCGATGC
CTTCAATTCATTCTCCAAAGACACTAAATGTTAAATCCTTCAGAGATTCA
CCTGCTATTATGAATTTCTTGTACCAACACAGTCTCATTTATAGGAACTA
TTGTTTGTGAAAATCCTCATTTGAAATTTTTATAAATATGAATATGTATT
CACTGCATGGTAATGCATCCAACATATTAAATTGAAAATGTTGGTAATTG
AAACCCAAGTTGGGCAGAATATAAACACAAAGAATTAAAGAAATGGTAAA
TGTCAGCCCAAGCCAGTAATATAATTGCATTATATATAGATTTTTATAAA
AAATTTACTCACAATTTATTTTTAAAACAGTTTATATCTTTAAATAAATA
TGATATAATTATTTTTAATTGAATTAACTTTAGAAATGGGGTTGCCTTTG
TATTATAATATTCAGACTAAAGAAATAAATACATTCTATTTAAGCAAAAG
ACA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAAGAAATAAGACTCCAACAAACCAAATAACCCA
ATAAACAATGAGGCACAGATAAACAGAGAATTCTCTACAGATAAATCTCT
AATGTCCCAGAAGCATGTAAAGAAATGTTCAACATCCTTAGTTATCATGG
GAAAAGCAAAAACAAACAAAAACAAACAAACAAAAAACAAAAACAAACAA
ACAAACAAAAAACCAAAAACCCAACAAGACAAAACAAAACAAAAAACAAC
CAAGTTTCCAACTTACACCAATCAGAATGGTTAAAAGGGGAGTGGGTGGG
TAAGGGGAGAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTNNTNNNNNNNNNNNNNNNTTTNNNNNTTTTTTT
TTTTTTTTTTTNNTTTTNTTTNNTTTTTTTTNTTTTTTTTTTTTTTTTTT
TTTTTTNTTTNNTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTNNTTTTTT
TTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTT

Query= MSMg01no519_c23.b1 MSMg01no519_c23.b1 CHROMAT_FILE:
MSMg01no519_c23.b1 PHD_FILE: MSMg01no519_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:49 2005
         (681 letters)



>mm_chr14_90224033_90225113
          Length = 1081

 Score = 1305 bits (675), Expect = 0.0
 Identities = 675/675 (100%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcttccagtattcagcaaggggcagtgctagaataatatgtttagaactcaaagca 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcttccagtattcagcaaggggcagtgctagaataatatgtttagaactcaaagca 266

                                                                       
Query: 67  tcatctacatagtcatttaaattatgttaattacactatcataagcatttgtcaaacaat 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcatctacatagtcatttaaattatgttaattacactatcataagcatttgtcaaacaat 326

                                                                       
Query: 127 aggaaaatgcctatgtaattaatgtctttcttgcatcaatttagtctttaattttttata 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aggaaaatgcctatgtaattaatgtctttcttgcatcaatttagtctttaattttttata 386

                                                                       
Query: 187 atgaataacaaattttaaaacatttgctcataatgccagctattcccttgagcttattac 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgaataacaaattttaaaacatttgctcataatgccagctattcccttgagcttattac 446

                                                                       
Query: 247 ttgatgaaagacaaccgatgccttcaattcattctccaaagacactaaatgttaaatcct 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttgatgaaagacaaccgatgccttcaattcattctccaaagacactaaatgttaaatcct 506

                                                                       
Query: 307 tcagagattcacctgctattatgaatttcttgtaccaacacagtctcatttataggaact 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcagagattcacctgctattatgaatttcttgtaccaacacagtctcatttataggaact 566

                                                                       
Query: 367 attgtttgtgaaaatcctcatttgaaatttttataaatatgaatatgtattcactgcatg 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 attgtttgtgaaaatcctcatttgaaatttttataaatatgaatatgtattcactgcatg 626

                                                                       
Query: 427 gtaatgcatccaacatattaaattgaaaatgttggtaattgaaacccaagttgggcagaa 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtaatgcatccaacatattaaattgaaaatgttggtaattgaaacccaagttgggcagaa 686

                                                                       
Query: 487 tataaacacaaagaattaaagaaatggtaaatgtcagcccaagccagtaatataattgca 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tataaacacaaagaattaaagaaatggtaaatgtcagcccaagccagtaatataattgca 746

                                                                       
Query: 547 ttatatatagatttttataaaaaatttactcacaatttatttttaaaacagtttatatct 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttatatatagatttttataaaaaatttactcacaatttatttttaaaacagtttatatct 806

                                                                       
Query: 607 ttaaataaatatgatataattatttttaattgaattaactttagaaatggggttgccttt 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttaaataaatatgatataattatttttaattgaattaactttagaaatggggttgccttt 866

                          
Query: 667 gtattataatattca 681
           |||||||||||||||
Sbjct: 867 gtattataatattca 881


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space:   718641
Effective search space used:   718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)