Query= MSMg01no519_h14.b1 MSMg01no519_h14.b1 CHROMAT_FILE:
MSMg01no519_h14.b1 PHD_FILE: MSMg01no519_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:12 2005
(394 letters)
>mm_chr14_25341226_25342017
Length = 792
Score = 692 bits (358), Expect = 0.0
Identities = 379/388 (97%), Gaps = 6/388 (1%)
Strand = Plus / Minus
Query: 5 gaattccaggcctgtgagaagatccttcctgtctcacaaccaacccaaaagttggacagc 64
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 530 gaattccaggccagtgagaagatccttcctgtctcacaaccaaaccaaaagttggacagc 471
Query: 65 acctgaaggctgacctctggcttctatacacatttacacatgcacatatgtacccgcaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acctgaaggctgacctctggcttctatacacatttacacatgcacatatgtacccgcaca 411
Query: 125 tgactgtatacacacacacacacacaaattaatataaatacagggaataatactacaggg 184
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgactgtat--acacacacacacacaaattaatataaatacagggaataatactacaggg 353
Query: 185 aatgatacagaaagaaacatctggggtcaagtccaaatcctgccactttggtctcaattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aatgatacagaaagaaacatctggggtcaagtccaaatcctgccactttggtctcaattt 293
Query: 245 taccatctataaattggaattaattacaccctcttctttggattcaggtagattcaaagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 taccatctataaattggaattaattacaccctcttctttggattcaggtagattcaaagg 233
Query: 305 agataacacatgtggtgttctgtaacatggctccaaaaagctaggtaaatctgactggaa 364
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aaataacacatgtggtgttctgtaacatggctccaaaaagctaggtaaatctgactggaa 173
Query: 365 nnaatctgtgttcagaaaataatgctgg 392
||||||||||||| |||||||||||
Sbjct: 172 --aatctgtgttcag--aataatgctgg 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 792
Length adjustment: 9
Effective length of query: 385
Effective length of database: 783
Effective search space: 301455
Effective search space used: 301455
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_h14.g1 MSMg01no519_h14.g1 CHROMAT_FILE:
MSMg01no519_h14.g1 PHD_FILE: MSMg01no519_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:12 2005
(673 letters)
>mm_chr14_25182798_25183870
Length = 1073
Score = 1170 bits (605), Expect = 0.0
Identities = 661/691 (95%), Gaps = 18/691 (2%)
Strand = Plus / Plus
Query: 1 atcagtctgttggctatctttgacccctgcatgacatatatatatatatatatacacaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 183 atcagtctgttggctatctttgacccctgcatgacatatatatatatatatatatatata 242
Query: 61 cacacaca------------------catagacataggcctaaagtacaaggcaggatat 102
| | | | ||||||||||||||||||||||||||||||||||
Sbjct: 243 tatatatatatatatatatatatagacatagacataggcctaaagtacaaggcaggatat 302
Query: 103 ctaggcatctccacatcacctgtttgtggactatgccatttttctcctggattctgatac 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctaggcatctccacatcacctgtttgtggactatgccatttttctcctggattctgatac 362
Query: 163 tcaggattaaggtctctgaagccaagttgtaccctgtgcatttttaaataagcctagaga 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcaggattaaggtctctgaagccaagttgtaccctgtgcatttttaaataagcctagaga 422
Query: 223 ggccatctctgtggttattattaggagaaatcctgagctgtttagatactgacctctcta 282
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggccatctctgtggtcattattaggagaaatcctgagctgtttagatactgacctctcta 482
Query: 283 cagagtaatgggagagccaagatccacagaaaaggcatctcaagcctggaccaaaatctt 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cagagtaatgggagagccaagatccacagaaaaggcatctcaagcctggaccaaaatctt 542
Query: 343 tggggtgtcactgggttgcagacgtgctgttttggactcagagtggtctgtccaccctct 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tggggtgtcactgggttgcagacgtgctgttttggactcagagtggtctgtccaccctct 602
Query: 403 ttgccttatcactatacaagtatactagtttgcttctacctaccaaggcaggaggattgc 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttgccttatcactatacaagtatactagtttgcttctacctaccaaggcaggaggattgc 662
Query: 463 taccaaccacccaacactctttagcaagcagatgatgaaggaagtgaagagctggccact 522
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 663 taccaaccacccaacactctttagcaagcagatgatgaaggaagtgaagacctggccact 722
Query: 523 tagttccagttgatgaccagtgagagaaatgagcttcgagatcacctggtcctcatatga 582
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 723 tagttccagttgatgaccagtgagaaaaatgagcttcaagatcacctggtcctcatatga 782
Query: 583 accaaccagtacccctagagctcccagggactaaaccaccaaccaaagagtgcacatgga 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 accaaccagtacccctagagctcccagggactaaaccaccaaccaaagagtgcacatgga 842
Query: 643 gggacccatggctccagtctcatatgtagca 673
||||||||||||||||| |||||||||||||
Sbjct: 843 gggacccatggctccagcctcatatgtagca 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
