Query= MSMg01no520_e18.b1 MSMg01no520_e18.b1 CHROMAT_FILE:
MSMg01no520_e18.b1 PHD_FILE: MSMg01no520_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:18 2005
(632 letters)
>mm_chr14_64733026_64734058
Length = 1033
Score = 1193 bits (617), Expect = 0.0
Identities = 623/625 (99%), Gaps = 1/625 (0%)
Strand = Plus / Plus
Query: 5 gaatt-catataatttgagaaaacacataaaacaatcctgcaaacacaaaggtgaatcca 63
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatataattagagaaaacacataaaacaatcctgcaaacacaaaggtgaatcca 264
Query: 64 tcattgaagctgaccaaaaagactcttgggagctgttcattcttaagtgctttaactatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcattgaagctgaccaaaaagactcttgggagctgttcattcttaagtgctttaactatg 324
Query: 124 ttcatcttcaaattctttctccggtgagctcaagaatccttgagattcaccttcaatcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcatcttcaaattctttctccggtgagctcaagaatccttgagattcaccttcaatcca 384
Query: 184 gcagaaggaggggcagtccagcgaaccctgacgcaggagcccattcctcctcttttgcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagaaggaggggcagtccagcgaaccctgacgcaggagcccattcctcctcttttgcct 444
Query: 244 ttattctgtggagtagtcacagagtgaaactaatcctctaacttgcagcaagtgcctatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttattctgtggagtagtcacagagtgaaactaatcctctaacttgcagcaagtgcctatc 504
Query: 304 tagccgtcctttgacccagactgcagaagaaacaaatggttttctccacagcatgacgtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagccgtcctttgacccagactgcagaagaaacaaatggttttctccacagcatgacgtt 564
Query: 364 gtttatcaaaaacagcagaatccctaaagagaacaagaatggagtactcataaacacaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtttatcaaaaacagcagaatccctaaagagaacaagaatggagtactcataaacacaga 624
Query: 424 actttcccaacatctggtgtgtctgtgcctcacgttttccaaacctctacctcctgactc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 actttcccaacatctggtgtgtctgtgcctcacgttttccaaacctctacctcctgactc 684
Query: 484 tttaagacaccagggagcacactgaaccaagtgtaacagagatggtataaacaaactttg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttaagacaccagggagcacactgaaccaagtgtaacagagatggtataaacaaactttg 744
Query: 544 tctgttgctcatacgaaggcaggaccttcctatgagtgtgtgtgtgtgtgtgtgtgtgtg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tctgttgctcatacgaaggcaggaccttcctatgagtgtgtgtgtgtgtgtgtgtgtgtg 804
Query: 604 tgtgtgtgtgtgtgtgtgtgtgtgt 628
|||||||||||||||||||||||||
Sbjct: 805 tgtgtgtgtgtgtgtgtgtgtgtgt 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_e18.g1 MSMg01no520_e18.g1 CHROMAT_FILE:
MSMg01no520_e18.g1 PHD_FILE: MSMg01no520_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:18 2005
(661 letters)
>mm_chr14_64900627_64901687
Length = 1061
Score = 1023 bits (529), Expect = 0.0
Identities = 562/573 (98%), Gaps = 1/573 (0%)
Strand = Plus / Minus
Query: 90 ggtgcaaggtcttcggttcaaatcccagtactacacag-aaaaaaatgatgttctaaata 148
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 1061 ggtgcaaggtcttcggttcaaatcccagtactacacagaaaaaaaatgttgttctaaata 1002
Query: 149 tgtaaatagttatatcaagataaaagcttgagggccaggcatgcctgtaatgcaggacgt 208
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tgtaaatagttttatcaagataaaagcttgagggccaggcatgcctgtaatgcaggacgt 942
Query: 209 ggtaagctgagtcaggacgtgaataaaaggccagcttgggtcacgtaggtttaagcagcc 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ggtaagctgagtcaggacgtgaataaaaggccagcttgggtcacgtaggtttaagcagcc 882
Query: 269 tggaccttgtagtgaaacccccattagaaacaaagaaaatgttttaaaatggagggggaa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tggaccttgtagtgaaacccccattagaaacaaagaaaatgttttaaaatggagggggaa 822
Query: 329 aaagcaagggctttgagagcagtggttatgggggattgctgggaccatgggcacctgatg 388
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 821 aaagcaagggctttgagggcagtggttatgggggattgctgggaccatgggcacctgagg 762
Query: 389 gagtagggaggaaccttgtttaaaaatagtcatgctgatttgttggtaaaagtatcaatt 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 761 gagtagggaggaaccttgtttaaaaatagtcatgctgatttgttggtaaaagtatgaatt 702
Query: 449 tttcttctgtgtgtcactgcagcaatgaaggtgctataagaactttgttcttgtttttct 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tttcttctgtgtgtcactgcagcaatgaaggtgctataagaactttgttcttgtttttct 642
Query: 509 tgctcatagaaataattgaaatattctagcattaggaatgtgggacatggaatacattct 568
|||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 641 tgctcatagaaataattgaaatatcctagcattaggaatgtgggacacagaatacattct 582
Query: 569 tcagtagtcagtccatatatatatttgcttctgtttcaaaaatatagatgcttatatacg 628
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 581 tcagtagtcagtccatatatatatttgcttctgtttcaaaaatatagatgcttatatatg 522
Query: 629 actatccttagagatgctagtgggccctggaga 661
||||||||||||||||| |||||||||||||||
Sbjct: 521 actatccttagagatgccagtgggccctggaga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
