Query= MSMg01no520_n14.b1 MSMg01no520_n14.b1 CHROMAT_FILE:
MSMg01no520_n14.b1 PHD_FILE: MSMg01no520_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:00 2005
(336 letters)
>mm_chr14_113818699_113819432
Length = 734
Score = 615 bits (318), Expect = e-180
Identities = 328/332 (98%), Gaps = 2/332 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttcatgaattggtgttagttaatttgttacttgtttgactatactgaaagcc 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtttatgaattggtgttagttaatttgttacttgtttgactatactgaaagcc 264
Query: 65 tagttacttttctctgctagtttattgccaggaaatgactcagagaagaccccaaatact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagttacttttctctgctagtttattgccaggaaatgactcagagaagaccccaaatact 324
Query: 125 gtcttttactgtaatttttcttatttagcaaatgagttactgtctagtatccaggagtga 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtcttttactgtcatttttcttatttagcaaatgagttactgtctagtatccaggagtga 384
Query: 185 gtaattatacctagattaggatctcaaataaaatggatttttatcagcggtatcacgtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaattatacctagattaggatctcaaataaaatggatttttatcagcggtatcacgtta 444
Query: 245 gtattagaaatttacttggtgtcattttgaagagattcatctctctagctatatttacaa 304
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 gtattagaaatttacttggtgtcattttgaagagattcatctct--agctatatttacaa 502
Query: 305 acttcttttgagctttccaggattagttgttt 336
||||||||||||||||||||||||||||||||
Sbjct: 503 acttcttttgagctttccaggattagttgttt 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 734
Length adjustment: 9
Effective length of query: 327
Effective length of database: 725
Effective search space: 237075
Effective search space used: 237075
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_n14.g1 MSMg01no520_n14.g1 CHROMAT_FILE:
MSMg01no520_n14.g1 PHD_FILE: MSMg01no520_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:00 2005
(289 letters)
>mm_chr14_113863596_113864284
Length = 689
Score = 499 bits (258), Expect = e-146
Identities = 281/289 (97%)
Strand = Plus / Minus
Query: 1 agtaataactaggaaatgcacgtgaatataatagtgggaaggaaaatactggtatattca 60
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 625 agtaataactaggaattgcacgtgaatataatagtaggaaggaaaatactggtatattca 566
Query: 61 ctcatcaaatatttattcatacctatgaggtacacagcactgtactctatgctgtgcaca 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 ctcatcaaatatttattcatacctatgaggtacacagcactgtactctatcctgtgcaca 506
Query: 121 tcatagctggacacagagacaagtgaaacattagcagaaaagagttcattgggacagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcatagctggacacagagacaagtgaaacattagcagaaaagagttcattgggacagaag 446
Query: 181 atggaaggagcaggagatatgctttggggaaaacatgatactaatatcattgagcttgac 240
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 atggaaggagcaggagataggctttggggaaaacatgataccaatatcattgagcttgac 386
Query: 241 attgatgaagagaaattgtggtgggggtcatgaatcangaaagctttag 289
||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 385 gttgatgaagagaaattggggtgggggtcatgaatcaggaaagctttag 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
