Query= MSMg01no521_o20.b1 MSMg01no521_o20.b1 CHROMAT_FILE:
MSMg01no521_o20.b1 PHD_FILE: MSMg01no521_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:24 2005
(649 letters)
>mm_chr14_72477383_72478431
Length = 1049
Score = 897 bits (464), Expect = 0.0
Identities = 467/468 (99%)
Strand = Plus / Minus
Query: 182 ctgctctaattattaactttatggtgacattgttctgtgccccacccccaagttccttta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 ctgctctaattattaactttatggtgacattgttctgtgccccacccccaagttccttta 990
Query: 242 gttctgcaatttctatttaatctcacactgttcttttcatctgctgacattcagtccctt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gttctgcaatttctatttaatctcacactgttcttttcatctgctgacattcagtccctt 930
Query: 302 ttgatacacagaattcttaaggtcaccaagttgctttatccatggaacacacatgtgaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 ttgatacacagaattcttaaggtcaccaagttgctttatccatggaacacacatgtgaaa 870
Query: 362 tgctctggtcctcaggttgctgctaaagtgctgtgcctgcattcctagtattgacacaag 421
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 869 tgctctggtcctcaggttgctgctaaagtgctgtgcctgcattcctggtattgacacaag 810
Query: 422 tcactatgtatcatgaatgggcaggtccaactgtcaaggtccagtatgtctaactcttct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tcactatgtatcatgaatgggcaggtccaactgtcaaggtccagtatgtctaactcttct 750
Query: 482 taatgtctttcctactacagcaagacattttttgtttccctttggagacaattctagaag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 taatgtctttcctactacagcaagacattttttgtttccctttggagacaattctagaag 690
Query: 542 taactcattctttgcagttttcagcactctgttggttcatagtcaatacaactgttagct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 taactcattctttgcagttttcagcactctgttggttcatagtcaatacaactgttagct 630
Query: 602 ggagttctatgatgatttacttgataatttgtgctctgggctttcttt 649
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ggagttctatgatgatttacttgataatttgtgctctgggctttcttt 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_o20.g1 MSMg01no521_o20.g1 CHROMAT_FILE:
MSMg01no521_o20.g1 PHD_FILE: MSMg01no521_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:24 2005
(693 letters)
>mm_chr14_72310304_72311396
Length = 1093
Score = 1299 bits (672), Expect = 0.0
Identities = 689/696 (98%), Gaps = 3/696 (0%)
Strand = Plus / Plus
Query: 1 ttgatgggctgggtctgagctactatgtaaagcagctacaacatcatatatacttggcaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgatgggctgggtctgagttactatgtaaagcagctacaacatcatatatacttggcaa 260
Query: 61 gggtgactgaagcacctctgttgtttgagcaactgaaaatacatcgatatatattcctgc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gggtgactgaagcacctctgttgtttgagcaactgaaaatacatggatatatattcctgc 320
Query: 121 tacaaagtcgagtctttctgtaagactgcactgagccatgtagccaggaggaaaacacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaaagtcgagtctttctgtaagactgcactgagccatgtagccaggaggaaaacacgt 380
Query: 181 caatgggcacaaatcttgtgctttaactttaatctctttactcgttccctagttctataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatgggcacaaatcttgtgctttaactttaatctctttactcgttccctagttctataa 440
Query: 241 ccattcattcattctctgattcagcaaaacccaagtgtgctgagaatctacttcctgcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccattcattcattctctgattcagcaaaacccaagtgtgctgagaatctacttcctgcaa 500
Query: 301 taggttcaggcatacatatgtgaatatagaaggttgggcacctgcccccacccatttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taggttcaggcatacatatgtgaatatagaaggttgggcacctgcccccacccatttccc 560
Query: 361 aggggccaagaaaagaaggcatgtatgaaggggaaggaatacagagaagtgaagctgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggggccaagaaaagaaggcatgtatgaaggggaaggaatacagagaagtgaagctgtga 620
Query: 421 agaacaaaagagatgtgctcaggcagaattaaacatcagtgaagttttctgtggggtggt 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaacaaaagagatgcgctcaggcagaattaaacatcagtgaagttttctgtggggtggt 680
Query: 481 gtctaaatagcatcgataacaaagaactcagagaaacaagaatgttccattctcttacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctaaatagcatcgataacaaagaactcagagaaacaagaatgttccattctcttacat 740
Query: 541 tttacttgtgaaagggaccatggaccactaagttacacataagaaactttctttgaaaga 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtacttgtgaaagggaccatggaccactaagttacacataagaaactttctttgaaaga 800
Query: 601 ataccaggccatcccctttccagcaggcttttcactatgttttttttt---aaatcattc 657
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 801 ataccaggccatcccctttccagcaggcttttcactatgttttttttttttaaatcattc 860
Query: 658 catttagttacatctcaaatgacatcccccttcttg 693
||||||||||||||||||||||||||||||||||||
Sbjct: 861 catttagttacatctcaaatgacatcccccttcttg 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
