Query= MSMg01no521_p14.b1 MSMg01no521_p14.b1 CHROMAT_FILE:
MSMg01no521_p14.b1 PHD_FILE: MSMg01no521_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:27 2005
(514 letters)
>mm_chr14_116162214_116163127
Length = 914
Score = 911 bits (471), Expect = 0.0
Identities = 504/515 (97%), Gaps = 2/515 (0%)
Strand = Plus / Plus
Query: 1 gattaaataata-tttaaagaagaattaaaaagaaaatattaaaagggaggaagtggaaa 59
|||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 gattaaataatattttaaa-aagaataaaaaagaaaatattaaaagggaggaagtggaag 259
Query: 60 gatgatggaagagggaaggttgatataagaacatgtgtggttctatctctctgtgctctc 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gctgatggaagagggaaggttgatataagaacatgtgtggttctatctctctgtgctctc 319
Query: 120 agatccccaagtcatgagcatctgtagtgcaacctcctactacaagcacagtgctaattc 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 320 agatccccaagtcatgagcatctgtagtgcaacctcctactccaagcacagtgctaattc 379
Query: 180 tttagctttcactcctgccctacaatggtggactatatagtctgaaccttgagccaacat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttagctttcactcctgccctacaatggtggactatatagtctgaaccttgagccaacat 439
Query: 240 aagtattccctttctttggttagttcagtcagccattcagtcacagggagaaggaaaatg 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagtcttccctttctttggttagttcagtcagccattcagtcacagggagaaggaaaatg 499
Query: 300 atacagaatattgaaccagggcaggggccattgttttggtaaatctgcctgctttatagt 359
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atacagaaaattgtaccagggcaggggccattgttttggtaaatctgcctgctttatagt 559
Query: 360 ccttcaaaactagttactgagagcaattgaaaagggttttaaaattataaagaaaccaaa 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 ccttcaaaactagttactgagagcaattgaaaagggttttaaaattataaagaagccaaa 619
Query: 420 gaaggccatcagcagaccttggctcaattcaacataattctcagcatgtggtgtggtcac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaaggccatcagcagaccttggctcaattcaacataattctcagcatgtggtgtggtcac 679
Query: 480 tgctaaataccattagtgagatttactgtgcaaga 514
|||||||||||||||| ||||||||||||||||||
Sbjct: 680 tgctaaataccattagcgagatttactgtgcaaga 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_p14.g1 MSMg01no521_p14.g1 CHROMAT_FILE:
MSMg01no521_p14.g1 PHD_FILE: MSMg01no521_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:27 2005
(535 letters)
>mm_chr14_116334704_116335638
Length = 935
Score = 1011 bits (523), Expect = 0.0
Identities = 532/535 (99%)
Strand = Plus / Minus
Query: 1 ttttaaattgaatttttaaaacgaatctttagctttgtacttttaaagacttttttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttttaaattgaatttttaaaacgaatctttagctttgtacttttaaagacttttttaaaa 584
Query: 61 agttatttgtttaaaactttatggagaaaacattttcagatgaattttaccaggttggat 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agttatttgtgtaaaactttatggagaaaacattttcagatgaattttaccaggttggat 524
Query: 121 tctgaagacatgagaaaaaaactgcatggctaggtgttatagtttgtctttattcattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tctgaagacatgagaaaaaaactgcatggctaggtgttatagtttgtctttattcattgg 464
Query: 181 tgggaagaaacccataagcttcccaatataacatagatgggatttgattctctgattcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgggaagaaacccataagcttcccaatataacatagatgggatttgattctctgattcta 404
Query: 241 caagccagttcccatctcaccactactatataactcatgaaaggcagaaaacagaaataa 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 403 caagccagttcccatctcaccactactatataactcatgaaagacagaaaacagaaataa 344
Query: 301 aattatctaagaatataatccttagatgacagaatctttctcgttcttaaattaaaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aattatctaagaatataatccttagatgacagaatctttctcgttcttaaattaaaaatg 284
Query: 361 agagagaaaaataacacagagaaacactgtgttgtagaagaaggaaagaaaacatctgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agagagaaaaataacacagagaaacactgtgttgtagaagaaggaaagaaaacatctgtt 224
Query: 421 ctatgatactgacattaagtccacagagaaaattgtagaaatgccagccaatgattggtt 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 223 ctatgatactgacattaagtccacagaggaaattgtagaaatgccagccaatgattggtt 164
Query: 481 cagcttgagagtcatgccaatagagagagcacacccctgacactgcctggaggac 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cagcttgagagtcatgccaatagagagagcacacccctgacactgcctggaggac 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
