Query= MSMg01no524_b09.b1 MSMg01no524_b09.b1 CHROMAT_FILE:
MSMg01no524_b09.b1 PHD_FILE: MSMg01no524_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:14 2005
(651 letters)
>mm_chr14_111498576_111499626
Length = 1051
Score = 1220 bits (631), Expect = 0.0
Identities = 643/647 (99%)
Strand = Plus / Plus
Query: 5 ggaattctctctttttttaaaaaattagatattttctttatttacagtttaaatgctatc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctctcttttttaaaaaaattagatattttctttatttacagtttaaatgctatc 264
Query: 65 ccaaaagttccctataccctcccctcgccctgctcccctaccgacccactcccatttctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaaaagttccctataccctcccctcgccctgctcccctaccgacccactcccatttctt 324
Query: 125 ggccctggcattcccctgtactggggcatataaggtctgcaagaccaaggggcctctctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggccctggcattcccctgtactggggcatataaggtctgcaagaccaaggggcctctctt 384
Query: 185 cccaatgatggccgactaggccatcttctgctacatatgcagctagagatatgagctctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccaatgatggccgactaggccatcttctgctacatatgcagctagagatatgagctctg 444
Query: 245 tgtatattggttagttcatattgttgttccacctagagggttacagaccccttccactcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtatattggttagttcatattgttgttccacctagagggttacagaccccttccactcc 504
Query: 305 ttgggtactttctctacctcctctattgagggccctgtgttcctaccaatagatgactgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgggtactttctctacctcctctattgagggccctgtgttcctaccaatagatgactgt 564
Query: 365 gagcatgcacttctgtgtttgccaggtactggcatagcctcactcgagacagctatatca 424
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagcatgtacttctgtgtttgccaggtactggcatagcctcactcgagacagctatatca 624
Query: 425 ggccttttggaattttcaaattaatattttatatacatagttaaatattttatacattta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggccttttggaattttcaaattaatattttatatacatagttaaatattttatacattta 684
Query: 485 taccttatggtgtaattgttacttccttcatctactactccactaagaatcatccaactc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taccttatggtgtaattgttacttccttcatctactactccactaagaatcatccaactc 744
Query: 545 aacaaacaaaactctccaactttatattcctgcttgtatttccatccatctctgtttttc 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 745 aacaaacaaaactctccaactttatattcctgcttgtatttccatccatctctggttttc 804
Query: 605 caaaaattgaatggatttagtgcctttcatccatgaacaacctagac 651
||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 805 caaaaattgaatggatttagtgcctttcaaccatgaacaacctagac 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_b09.g1 MSMg01no524_b09.g1 CHROMAT_FILE:
MSMg01no524_b09.g1 PHD_FILE: MSMg01no524_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:14 2005
(590 letters)
>mm_chr14_111646578_111647568
Length = 991
Score = 1120 bits (579), Expect = 0.0
Identities = 588/591 (99%), Gaps = 1/591 (0%)
Strand = Plus / Minus
Query: 1 tcattttatagtactagactgtgaataggatgtgagttcatttcctttaaatttcaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tcattttatagtactagactgtgaataggatgtgagttcatttcctttaaatttcaatta 732
Query: 61 cacaatactgtctttaaataaatatcatttatatcatcatttattacattgattaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cacaatactgtctttaaataaatatcatttatatcatcatttattacattgattaatctt 672
Query: 121 gagagatatataaaaattaacatacactaatacattaacataatcataaaactgtgtttt 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 671 gagagatatataaaaattaacatacactaatatattaacataatcataaaactgtgtttt 612
Query: 181 gcgtacatatattacggtagtattgaagattgtcactacacctgtattaatactgcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gcgtacatatattacggtagtattgaagattgtcactacacctgtattaatactgcatca 552
Query: 241 aaaaccaagacacagttacatttctgcttttggtttgaaatatacatttttga-tttaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 551 aaaaccaagacacagttacatttctgcttttggtttgaaatatacatttttgattttaga 492
Query: 300 atatttaaggcttttgggtatgtatattaacatgtgaatctagattattgttagaccaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atatttaaggcttttgggtatgtatattaacatgtgaatctagattattgttagaccaac 432
Query: 360 aagattttctaaatattcattgagctagaagtttaatcttcagaaaatatatataaatga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aagattttctaaatattcattgagctagaagtttaatcttcagaaaatatatataaatga 372
Query: 420 gaaatgtaataatttaggccgatgtgaaatgaaactaatcagttgaaaaaatcacttaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaaatgtaataatttaggccgatgtgaaatgaaactaatcagttgaaaaaatcacttaga 312
Query: 480 atcatctaaattatatacccattttaggattaaaacacctctaatgaacaaaccacagca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atcatctaaattatatacccattttaggattaaaacacctctaatgaacaaaccacagca 252
Query: 540 cagagacttcatgtctgaaactgcatcaaaaaattgctccaggcattagcc 590
|||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 251 cagagacttcatgtctgaaactgcatcaaaaaattgctccagccattagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 991
Length adjustment: 10
Effective length of query: 580
Effective length of database: 981
Effective search space: 568980
Effective search space used: 568980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
