Query= MSMg01no525_n15.b1 MSMg01no525_n15.b1 CHROMAT_FILE:
MSMg01no525_n15.b1 PHD_FILE: MSMg01no525_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:36 2005
(638 letters)
>mm_chr14_95425512_95426549
Length = 1038
Score = 1226 bits (634), Expect = 0.0
Identities = 634/634 (100%)
Strand = Plus / Minus
Query: 5 gaattcatatgctcatttatcatattttgtctacaaaatgctcttttcttgaaataatca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gaattcatatgctcatttatcatattttgtctacaaaatgctcttttcttgaaataatca 734
Query: 65 gccacctctgcctcttaaaatcatctatatgttctttctcatagagctttgaggagaggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gccacctctgcctcttaaaatcatctatatgttctttctcatagagctttgaggagaggg 674
Query: 125 gtctgataaatacaaccaatttttggattgagcattcaaaccctttctctgaacatcagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gtctgataaatacaaccaatttttggattgagcattcaaaccctttctctgaacatcagc 614
Query: 185 cagttgtggctttctatattaattacattctacttcaagatgacacttcattcaagagtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cagttgtggctttctatattaattacattctacttcaagatgacacttcattcaagagtg 554
Query: 245 aaaaagtttcaagtcaaatacaacagtgtctgaatgttgagatttgctatattgacagta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aaaaagtttcaagtcaaatacaacagtgtctgaatgttgagatttgctatattgacagta 494
Query: 305 attagtcataattaatataattaagcaaataataattaatgttattgcatcagtaacatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 attagtcataattaatataattaagcaaataataattaatgttattgcatcagtaacatc 434
Query: 365 aataaaagttaataaatattattattattaataatttgcacatgttttcacttcacacta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aataaaagttaataaatattattattattaataatttgcacatgttttcacttcacacta 374
Query: 425 gagtgaaacggacaatatccattaggtactagaataaatataaactcagattctctcagg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gagtgaaacggacaatatccattaggtactagaataaatataaactcagattctctcagg 314
Query: 485 cttatcaacctacaatgttaattttttatatgaactcaaattaggtcaaatatatcaaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cttatcaacctacaatgttaattttttatatgaactcaaattaggtcaaatatatcaaaa 254
Query: 545 tagagataaatattcaatatcatgttgtttctattttcagttttttctcttcatttttac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tagagataaatattcaatatcatgttgtttctattttcagttttttctcttcatttttac 194
Query: 605 aggtcccacctctgcctaaaataagaaaacttat 638
||||||||||||||||||||||||||||||||||
Sbjct: 193 aggtcccacctctgcctaaaataagaaaacttat 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_n15.g1 MSMg01no525_n15.g1 CHROMAT_FILE:
MSMg01no525_n15.g1 PHD_FILE: MSMg01no525_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:36 2005
(622 letters)
>mm_chr14_95373241_95374262
Length = 1022
Score = 1191 bits (616), Expect = 0.0
Identities = 622/626 (99%), Gaps = 4/626 (0%)
Strand = Plus / Plus
Query: 1 aatacacttttattttcttttaattggataaacttaaattctatggtaacattttctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatacacttttattttcttttaattggataaacttaaattctatggtaacattttctcac 260
Query: 61 agggctgatatacaacattataacagctattaaataatggcttaattcttgtaacaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggctgatatacaacattataacagctattaaataatggcttaattcttgtaacaattg 320
Query: 121 gcatctatcacatattaattagccctaatggttttcagccttcaaggcttattttagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatctatcacatattaattagccctaatggttttcagccttcaaggcttattttagtat 380
Query: 181 tttaaaacctgaattcaattgcagctttatactattgtatatatattttttatttgtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaaacctgaattcaattgcagctttatactattgtatatatattttttatttgtttg 440
Query: 241 tttgattggttggatagttgtttttgggggactggctgagtggcagaaaacattattttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgattggttggatagttgtttttgggggactggctgagtggcagaaaacattattttg 500
Query: 301 gacacagttttgacataatgtagaataaattgagctattttatttaattaaactaggcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacacagttttgacataatgtagaataaattgagctattttatttaattaaactaggcac 560
Query: 361 tgatttattagataataaatattataatttcagttgttactcttaaatataatctagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgatttattagataataaatattataatttcagttgttactcttaaatataatctagaac 620
Query: 421 tgtgctatagttcatgtatctattcatgatgagtacacaaacactatttagattgtgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgctatagttcatgtatctattcatgatgagtacacaaacactatttagattgtgaaa 680
Query: 481 atagttcaacagtcttccactatgattcttgtaactgcataaacacacacacacacacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagttcaacagtcttccactatgattcttgtaactgcataaacacacacacacacacac 740
Query: 541 acacacacacacacacacacacacacacacacacac----taatcacctttagtcttcga 596
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 acacacacacacacacacacacacacacacacacacacactaatcacctttagtcttcga 800
Query: 597 tcaaaactacaccttgaagcacacca 622
||||||||||||||||||||||||||
Sbjct: 801 tcaaaactacaccttgaagcacacca 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 126
Number of extensions: 51
Number of successful extensions: 51
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
