Query= MSMg01no526_d21.b1 MSMg01no526_d21.b1 CHROMAT_FILE:
MSMg01no526_d21.b1 PHD_FILE: MSMg01no526_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:06 2005
(641 letters)
>mm_chr14_93094419_93095459
Length = 1041
Score = 627 bits (324), Expect = 0.0
Identities = 329/332 (99%), Gaps = 3/332 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaacttaattttaaaaatgagggaaaatgattattaaggatagaccttgatat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gaattctcaacttaattttaaaaatgagggaaaatgattattaaggatagaccttgatat 273
Query: 65 aactaggccatgtccttgatttaaaattgaaatatgagtaactgttaacctgatagtcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aactaggccatgtccttgatttaaaattgaaatatgagtaactgttaacctgatagtcat 213
Query: 125 ttacagaa---aacaacaacaacaacaacaaaacagtaggttgattacattttttgttgt 181
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttacagaaaacaacaacaacaacaacaacaaaacagtaggttgattacattttttgttgt 153
Query: 182 tgttgtatgtctttttttaaatatgttttattattatgtattttcctcaattacatttag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tgttgtatgtctttttttaaatatgttttattattatgtattttcctcaattacatttag 93
Query: 242 aatgctatcccaaaagtcccccataccctcccccccacttccctacccacccattcccat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 aatgctatcccaaaagtcccccataccctcccccccacttccctacccacccattcccat 33
Query: 302 tttttggccctggaattcccctgtactgggac 333
||||||||||||||||||||||||||||||||
Sbjct: 32 tttttggccctggaattcccctgtactgggac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_d21.g1 MSMg01no526_d21.g1 CHROMAT_FILE:
MSMg01no526_d21.g1 PHD_FILE: MSMg01no526_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:06 2005
(636 letters)
>mm_chr14_92907208_92908243
Length = 1036
Score = 1230 bits (636), Expect = 0.0
Identities = 636/636 (100%)
Strand = Plus / Plus
Query: 1 attcaccttgctgttcttcactgatcatcatttgtcatgacttcctagagagcaacacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcaccttgctgttcttcactgatcatcatttgtcatgacttcctagagagcaacacca 260
Query: 61 ccaaagaaattctggtgatatttgggggacttttttagactcgggccaattggcaaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaaagaaattctggtgatatttgggggacttttttagactcgggccaattggcaaagcc 320
Query: 121 ttgcagtttcttctggattgagttgccattgctgatttgttaaaggtgtttgtgagtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcagtttcttctggattgagttgccattgctgatttgttaaaggtgtttgtgagtggg 380
Query: 181 attgagttgccattgcagatttgtttgaaatgaactgctgatatcctaacaaggcagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgagttgccattgcagatttgtttgaaatgaactgctgatatcctaacaaggcagatt 440
Query: 241 ggatttgctccaaagaactatttctaaacagttccgcatcctcctttgcctattaaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggatttgctccaaagaactatttctaaacagttccgcatcctcctttgcctattaaaatt 500
Query: 301 tctgttccactacctctggtgggtgctgggatagaagggaggttaaagcattttagaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgttccactacctctggtgggtgctgggatagaagggaggttaaagcattttagaatc 560
Query: 361 cttattagaagcaagttttgaaaaatataagccaaaaatgccactttctaaaaaaaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttattagaagcaagttttgaaaaatataagccaaaaatgccactttctaaaaaaaagtt 620
Query: 421 ttgtttttaattcaatgaattaacttagtacccacattatggttcaaactcaccatgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtttttaattcaatgaattaacttagtacccacattatggttcaaactcaccatgcct 680
Query: 481 gcaaactaaacttctacttttaaggaaaaaaaaaagaaagaaagaaaagaaaagaaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaaactaaacttctacttttaaggaaaaaaaaaagaaagaaagaaaagaaaagaaagaa 740
Query: 541 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa 800
Query: 601 agaaagagagaaagaaagaaaacataacagtctcat 636
||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaaagagagaaagaaagaaaacataacagtctcat 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 135
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
