Query= MSMg01no526_f18.b1 MSMg01no526_f18.b1 CHROMAT_FILE:
MSMg01no526_f18.b1 PHD_FILE: MSMg01no526_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:15 2005
(585 letters)
>mm_chr14_23528602_23529586
Length = 985
Score = 1071 bits (554), Expect = 0.0
Identities = 572/578 (98%)
Strand = Plus / Plus
Query: 8 ttctctatggacagccacatcaaacaagggtgcttagctttcagcctcacccccatggag 67
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 208 ttctctatggacagccacatcaaacaagagtgcttagctttcagcctcacccccatggag 267
Query: 68 aatgctgtcatgttgagactcttgggatctcaaggcagacaagggatttaggtccaaacc 127
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aatgttgtcgtgttgagactcttgggatctcaaggcagacaagggatttaggtccaaacc 327
Query: 128 aaatttcactttgacgttttgcttaagtgtgtttcttgttgcttggcataggtgatagga 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gaatttcactttgacgttttgcttaagtgtgtttcttgttgcttggcataggtgatagga 387
Query: 188 attaaggcaaggtgaataaaataattacatcgtgattttaatttaattagataactggac 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attaaggcaaggtgaataaaataattacatcgtgattttaatttaattagataactggac 447
Query: 248 tctccttcccccctcaacctccatgtggatttgctttctaaaatatgaccattttaaatc 307
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 448 tctccttcccccctcaacctccatgtggatttgctttctaaagtatgaccattttaaatc 507
Query: 308 tgagcaagaatgcatagcagagaaggctgcacaagtgaacaacaaaaatccccggttcag 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgagcaagaatgcatagcagagaaggctgcacaagtgaacaacaaaaatccccggttcag 567
Query: 368 agactcaatgggaataatttaagtgggaaaaggcctctttgcaagtggggctggggtgag 427
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 568 agactcaatgggaataatttaagtggaaaaaggcctctttgcaagtggggctggggtgag 627
Query: 428 gtagggggccgtgaacgactctttcaagatttccatttccggcaacttcggttggtcaac 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtagggggccgtgaacgactctttcaagatttccatttccggcaacttcggttggtcaac 687
Query: 488 atccatgtttttattcagctgcctgtgactggacacctcatgtaggcctaaggcctgagc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 atccatgtttttattcagctgcctgtgactggacacctcatgtaggcctaaggcctgagc 747
Query: 548 ccattctgtcaagtttaaaggaggagatattttcagac 585
||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ccattctgtcaagtttaaaggaggagatattttcagac 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_f18.g1 MSMg01no526_f18.g1 CHROMAT_FILE:
MSMg01no526_f18.g1 PHD_FILE: MSMg01no526_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:15 2005
(247 letters)
>mm_chr14_23706052_23706698
Length = 647
Score = 433 bits (224), Expect = e-126
Identities = 246/264 (93%), Gaps = 17/264 (6%)
Strand = Plus / Minus
Query: 1 attctctactcataaatagatacttagtggctgatttttatctttaggcagttacaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 attctctactcataaatagatacttagtggctgatttttatctttaggcagttacaaaag 248
Query: 61 tactggtgccaaatttataaagaatgtcaaggccaaaatcctcttcttgtgtgtgtgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tactggtgccaaatttataaagaatgtcaaggccaaaatcctcttcttgtgtgtgtgtgt 188
Query: 121 gtgtgtgtgtgtgtgtgtgtgtgt-----------------gtgtgtgtacatgtttgta 163
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 187 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtacatgtttgta 128
Query: 164 catgagtgtatgtgtcttagagtttgatgccattcacggagtccctactcaggggtacaa 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 catgagtgtatgtgtcttagagtttgatgccattcacggagtccctactcaggggtacaa 68
Query: 224 gtgctacctacaacctttacaatg 247
||||||||||||||||||| ||||
Sbjct: 67 gtgctacctacaacctttataatg 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
