NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACTGATGTCCATTCACGACATGAAACTATCTGGATCTACGCCA
CCTTCCAAGTCGCCAAACCATCAGGTACTCTATGGTAACCAATAAGAAAA
TAATTGCCTAGAATATTGAGTGTCCTGATTCCCAAATACTGTGGCATAAA
GCCTAAGTCACTTTAAAGTTGAACCCTGTTTTCAAGTGGTCTGAATTAAA
TCGTGGATTTATTACATCTAGTGTCAGTTAGGCAAAGTTATTTGATCTCC
CTGAGGCTCTACCAAAGAAGCCCAGTATATTATGTATGTCTATCTGGTGA
TGTAGATTAAATTATATAATCCACCGGAGCCCATAGCCCTGAGATGAGAT
GTTATGATTGCTTTTAAAAAGTCATGAGATTGTACATGACTATTAGTCAT
CTGAATAACCATTTGCATACCATTAAGAAACCTCAGGAGTACACAAAACT
AAACAAGTATTTACAGTATAATCTGGCAGTAAGCTCCTTACTGTTTATTC
AAGTGGGTTGAAACTTTATTTTCACACAAAAACCTAACCATAGATATTCA
TAGCAGCTTCCTTCATAATTGCAAAACTTAGAAGTATATGAGATATGTGA
ATAATTGAGCTGTGGTATAGCTCACCGACAGAATATTATTCCGAAAGTAA
AAGAAATGGGGCCAGAAACCCTAAAAGATGTTGTAGAAAAGTCCAATTTT
TGTTCTGCGAAAAACTCNGCTTGGAAAGTAACATGACTCC

ACGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAATTGATCTGATCTTTAGCGCTA
TCGTCTTCGGCTTCCTGGATCTTTAGGAAGTGCTGTGTGGTAGGGCTGGA
GATAACAATGCAGCCTACAATGCTGTGAGAGCTCACACGGTATAAGAATG
TGACCCAGAGAAGAACAACGGAGTGAAAACATCAAATTAAATAACAAATT
GAATTTGAAGTTCTGACCTCGANGTACAGATTTGAGAGAGAGCTGAAGAA
GTAGAAAATTCCCCTCAGCTTATATTACAAATTGGGGAAAATATTTTCTT
TAACCTTTTTTTCCCTCCAGCTAAAAATGGGGGTGGGAAAAGGGGCTATT
TAAAAAGTCCAGCCTTCAGTAAACCCACAAATTCCTCCGGCAATAAAATA
ATTCCAAATGCCCCCCAAACCTGAAATGGGGAATCCCCCTTCTGTAGGGC
CATTTGGCTTCTTTGGCCCCCCGGGGTTCAGCGTGGCCCCCCCGGGAAAA
AAAACCCCCCCCCGGGGGCCTTTTTTAAAAAAAACGTTTTTTAGGGGGTG
GGGTAAACAATTTTGGGGGGGTTTTCCCCCCCCCCCTTCTTTGGGGGGAG
AGAAAAAACACCCCCCCTCTTTGTTAAAAAAAAATTTTTTATAATAT

Query= MSMg01no527_h23.b1 MSMg01no527_h23.b1 CHROMAT_FILE:
MSMg01no527_h23.b1 PHD_FILE: MSMg01no527_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:45 2005
         (541 letters)



>mm_chr14_106431819_106432759
          Length = 941

 Score = 1000 bits (517), Expect = 0.0
 Identities = 532/537 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactgatgtccattcacgacatgaaactatctggatctacgccaccttccaagtc 64
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 645 gaattcactgatgtccattcacgacatgaaactatgtggatctacgccaccttccaagtc 586

                                                                       
Query: 65  gccaaaccatcaggtactctatggtaaccaataagaaaataattgcctagaatattgagt 124
            ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 585 accaaaccatcaggtactctgtggtaaccaataagaaaataattgcctagaatattgagt 526

                                                                       
Query: 125 gtcctgattcccaaatactgtggcataaagcctaagtcactttaaagttgaaccctgttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gtcctgattcccaaatactgtggcataaagcctaagtcactttaaagttgaaccctgttt 466

                                                                       
Query: 185 tcaagtggtctgaattaaatcgtggatttattacatctagtgtcagttaggcaaagttat 244
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 465 tcaagtggtctgaattaaatcgtggacttattacatctagtgtcagttaggcaaagttat 406

                                                                       
Query: 245 ttgatctccctgaggctctaccaaagaagcccagtatattatgtatgtctatctggtgat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttgatctccctgaggctctaccaaagaagcccagtatattatgtatgtctatctggtgat 346

                                                                       
Query: 305 gtagattaaattatataatccaccggagcccatagccctgagatgagatgttatgattgc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gtagattaaattatataatccaccggagcccatagccctgagatgagatgttatgattgc 286

                                                                       
Query: 365 ttttaaaaagtcatgagattgtacatgactattagtcatctgaataaccatttgcatacc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 285 ttttaaaaagtcatgagattgtacatgactattagtcatctgaataaccatttgcataca 226

                                                                       
Query: 425 attaagaaacctcaggagtacacaaaactaaacaagtatttacagtataatctggcagta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 attaagaaacctcaggagtacacaaaactaaacaagtatttacagtataatctggcagta 166

                                                                    
Query: 485 agctccttactgtttattcaagtgggttgaaactttattttcacacaaaaacctaac 541
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 agctccttactgtttattcaagtgggttgaaactttattttcacacaaaaacctaac 109


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space:   494361
Effective search space used:   494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)