Query= MSMg01no528_c03.b1 MSMg01no528_c03.b1 CHROMAT_FILE:
MSMg01no528_c03.b1 PHD_FILE: MSMg01no528_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:39 2005
(382 letters)
>mm_chr14_119273739_119274518
Length = 780
Score = 677 bits (350), Expect = 0.0
Identities = 371/378 (98%), Gaps = 2/378 (0%)
Strand = Plus / Minus
Query: 4 ggaattcacctgcatctttgttccaaaaccacctgatcaagttccatgccttgaaaaatg 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ggaattcacctgtatctttgttccaaaaccacctgatcaagttccatgccttgaaaaatg 520
Query: 64 gccagtgtctcagtgacctagtgagtgttgggtgcaggcccatgggacacaggaaatgag 123
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 519 gccagtgtctcagtgacctagtgagtgttgggtgcagacccgtgggacacaggaaatgag 460
Query: 124 agagccaggcccacacaggccccagagcttccttagctggctttagattcagccgcctac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 459 agagccaggcccacacaggccccagagcttccttagctggctttagattcagccgcc-ac 401
Query: 184 cagtggccagctcagctagtggtcacatgctctcgctcagacaagcccgtgtggtttatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cagtggccagctcagctagtggtcacatgctctcgctcagacaagcccgtgtggtttatg 341
Query: 244 gtccacatacagggcaaaggcaccttggcctcaccagccctttctttggccatcatgaca 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtccacacacagggcaaaggcaccttggcctcaccagccctttctttggccatcatgaca 281
Query: 304 aatgacagcctctgacggacagaaccaagaaactagaaatcaacgacatggcagattggt 363
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 280 aatgacagcc-ctgacggacagaaccaagaaactagaaatcaacgacatggcacattggt 222
Query: 364 tgtgtgattgtttgactt 381
||||||||||||||||||
Sbjct: 221 tgtgtgattgtttgactt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 780
Length adjustment: 9
Effective length of query: 373
Effective length of database: 771
Effective search space: 287583
Effective search space used: 287583
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_c03.g1 MSMg01no528_c03.g1 CHROMAT_FILE:
MSMg01no528_c03.g1 PHD_FILE: MSMg01no528_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:39 2005
(582 letters)
>mm_chr14_119143117_119144098
Length = 982
Score = 998 bits (516), Expect = 0.0
Identities = 567/584 (97%), Gaps = 4/584 (0%)
Strand = Plus / Plus
Query: 1 acttagcaaaaaacagcaaacgtcacaggtagcatcatgatgctcacatagctagaagaa 60
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 acttagcaaaacacagcaaacgtcacagttagcatcatgatgctcacatagctagaagaa 260
Query: 61 actatggcagctgtgtgttctgtagc-cccccccccccccactgccccggtgtgcagaga 119
|||||||||||| ||||||||||||| || ||||||| ||||||||| ||||||||||||
Sbjct: 261 actatggcagctttgtgttctgtagcgccgcccccccaccactgccctggtgtgcagaga 320
Query: 120 tgaacagaggtggtgtccttaactagggggtgctctgtctaggaggacactgtcattgtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaacagaggtggtgtccttaactagggggtgctctgtctaggaggacactgtcattgtg 380
Query: 180 accttaatggacactgtcagttgtgacactgtgagccccaacccgcccccacctcagagg 239
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 acctttatggacactgtcagttgtgacactgtgaaccccaacccgcccccacctcagagg 440
Query: 240 ttaatattaaacattttcattaaactacttctctgttggcttaccaaatacaagcagcac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaatattaaacattttcattaaactacttctctgttggcttaccaaatacaagcagcac 500
Query: 300 actggagggccgactgagccttcctcatttccaacagcaaattcagaaaggcgagcactg 359
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 actggagggccaactgagccttcctcatttccaacagcaaatccagaaaggcgagcactg 560
Query: 360 atgtccttccttcccaaacaaaagccctcagggatcccaatacagctcatctctgctaat 419
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggtccttccttcccaaacaaaagccctcagggatcccaatacagctcatctctgctaat 620
Query: 420 cattcacgattgcatcactcgctgttgcctgacttttgcttctttggttattttgaattt 479
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 621 cattcacgattgcatcactcgctgttgcctga-tattgcttctttggttattttgaattt 679
Query: 480 aattctcattctctgaggtcaaatggaggagcaatgactgactttgaggtgaatagactg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 aattctcattctctgaggtcaaatggaggagcaatgactgactttgaggtgaatggactg 739
Query: 540 acttttt-cattgtcccttcaagcatcgctgcattttaggttta 582
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 740 -cttttttcattgtcccttcaagcatcgctgcattttaggttta 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
