Query= MSMg01no529_j17.b1 MSMg01no529_j17.b1 CHROMAT_FILE:
MSMg01no529_j17.b1 PHD_FILE: MSMg01no529_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:39 2005
(649 letters)
>mm_chr14_29314337_29315387
Length = 1051
Score = 1216 bits (629), Expect = 0.0
Identities = 645/651 (99%), Gaps = 2/651 (0%)
Strand = Plus / Minus
Query: 1 gaggggccaagggcaagtgtcctggaaagctagactgcattctaagaagcagtcccattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gaggggccaagggcaagtgtcctggaaagctagactgcattctaagaagcagtcccattg 792
Query: 61 tgggtgctggctggtttaactgggaaactaac--atgaaaaagggagaaatcaatgtctc 118
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 791 tgggtgctggctggtttaactgggaaactaacagatgaaaaagggagaaatcaatgtctc 732
Query: 119 tccactggggaagactcccaaaggagagcctccagtttgtggaagtccctcacctcctgg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tccactggggaagactcccaaaggagagcctccagtttgtggaagtccctcacctcctgg 672
Query: 179 ccaactacagctacacaggggcgtgtgctctctgattaagtcatctgaagacacacaggc 238
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 caaactacggctacacaggggcgtgtgctctctgattaagtcatctgaagacacacaggc 612
Query: 239 agggcatcgccatgcttctctcattaaaaatgctctggactccgaggaacaaataaatca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agggcatcgccatgcttctctcattaaaaatgctctggactccgaggaacaaataaatca 552
Query: 299 atattttttggctgctttcccaacagggttcttttcccaaagcacagtgcaagataagga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atattttttggctgctttcccaacagggttcttttcccaaagcacagtgcaagataagga 492
Query: 359 atttatgaacgacggcatccgtgtgccgcctttcccagcgggagaaagcagggtctgggt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atttatgaacgacggcatccgtgtgccgcctttcccagcgggagaaagcagggtctgggt 432
Query: 419 tgtcattctgggaaaatctaccctctttttatgcctggcaaataatgttttatggccctg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgtcattctgggaaaatctaccctctttttatgcctggcaaataatgttttatggccctg 372
Query: 479 ggtttatggtgggtgttttaatgatctgctgtagaaagcgggttttctctccagtcacta 538
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 371 ggtttatggtgggtgttttaatgatctgctgtagaaagtgggttttctctccagtcacta 312
Query: 539 gaatttgtcaagaaggcctggaggccataaaagagggctgggccctagggacaaacaggc 598
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaatttgtcaagagggcctggaggccataaaagagggctgggccctagggacaaacaggc 252
Query: 599 tccatcttctgaaataaactaataaagcgccccaagatgtttacctctttg 649
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tccatcttctgaaataaactaataaagcgccccaagatgtttacctctttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1051
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1041
Effective search space: 665199
Effective search space used: 665199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_j17.g1 MSMg01no529_j17.g1 CHROMAT_FILE:
MSMg01no529_j17.g1 PHD_FILE: MSMg01no529_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:39 2005
(653 letters)
>mm_chr14_29142398_29143450
Length = 1053
Score = 1216 bits (629), Expect = 0.0
Identities = 647/653 (99%)
Strand = Plus / Plus
Query: 1 aaaaacatcctgtttagtgtcaggtgacttcctaatatataaactagcatcaagtaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaacatcctgtttagtgtcaggtgacttcctaatatataaactagcatcaagtaggtt 260
Query: 61 tttagatatcagcttgaagagttccacagttgacagagagatgcatcgccggtgtggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttagatatcagcttgaagagttccacagttgacagagagatgcatcgccggtgtggcct 320
Query: 121 gaacaccaggactggatgaggaaagggtaaggtacagaggaagtaagaagaggacaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacaccaggactggatgaggaaagggtaaggtacagaggaagtaagaagaggacaggaa 380
Query: 181 acggcagtagtgttaagagtgtgggatagtaggaaccaacagaccccactggcatcccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acggcagtagtgttaagagtgtgggatagtaggaaccaacagaccccactggcatcccat 440
Query: 241 gagctgcatagccatggatccagagtcacagcgatgagacctacttgtcctgggtgtaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagctgcatagccatggatccagagtcacagcgatgagacctacttgtcctgggtgtaag 500
Query: 301 gtagcctacgccaaaggctctctttgtccatacaaggctgcacttgcttgtcttctgtca 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 gtagcctacgccaaaggctctctttgtccatacaaggctgtacttgcttgtcttctgtca 560
Query: 361 cagcatgtaagtcttgtcttaccctgagttgaagaagagaggttgcatagggcttctaag 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 cagcatataagtcttgtcttaccctgagttgaagaagagaggttgcatagagcttctaag 620
Query: 421 gaggtagagaagcctgtctagaacttagttatgtcatttaccaccctaccttctgccaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaggtagagaagcctgtctagaacttagttatgtcatttaccaccctaccttctgccaca 680
Query: 481 tcttcattcctgtgtgactgctaggagccatcatagacgaagtgttctgaagacacagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcttcattcctgtgtgactgctaggagccatcatagacgaagtgttctgaagacacagct 740
Query: 541 cctaagcctcatgcaatgtctgtccccacataggttaatttctaaaagtttgtgcatcag 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctaagcctcgtgcaatgtctgtccccacataggttaatttctaaaagtttgtgcatcag 800
Query: 601 ctgactcacaatgagtcagctggaaaatcaaatcatgagatagatgtatacat 653
||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 801 ctgactcacaatgagtcagctggaaaatcaaataatgagatagatatatacat 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
