Query= MSMg01no531_j24.b1 MSMg01no531_j24.b1 CHROMAT_FILE:
MSMg01no531_j24.b1 PHD_FILE: MSMg01no531_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:18 2005
(631 letters)
>mm_chr14_101121829_101122860
Length = 1032
Score = 951 bits (492), Expect = 0.0
Identities = 526/540 (97%), Gaps = 6/540 (1%)
Strand = Plus / Minus
Query: 1 attttacgatgctgaagactagattctttcatgccattatcttcaccgaggattttattt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 attttatgatgctgaagactagattctttcatgccattatcttcaccgaggattttattt 893
Query: 61 caaaatttattatcatgctgacaatagagccaaaaaatccacagaagcaaaggcagctta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 892 caaaatttattatcatgctgacaatagagccaaaaaatccacagaagcaaaggcggctta 833
Query: 121 aacccaattcgttttgtgggccatcattgtctaagaagagggggactgagcttgggataa 180
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 832 aacccaattcgttttctgggccatcattgtctaagaagagggggactgaacttgggataa 773
Query: 181 ccttaaagcaaagcaaagcaaagcaaag-----caaaaacaacaacaaaacaatatctca 235
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 772 ccttaaagcaaagcaaagcaaagcaaagcaaaacaaaaacaacaacaaaacgatatctca 713
Query: 236 catcggcaataggtaagtgctctagaaacaggtgacctccacacaagtcgaagaacagtg 295
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 catcggcaattggtaagtgctctagaaacaggtgacctccacacaagtcgaagaacagtg 653
Query: 296 ccaatgtggccaatgttagttaacattcctagttaacaggaattcttccaaaaaa-cagt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 652 ccaatgtggccaatgttagttaacattcctagttaacaggaattcttccaaaaaaccagt 593
Query: 355 ttaaaagataaagtgaagccaagtgtacagtgagactgaaaatgataatgagaaaaacct 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ttaaaagataaagtgaagccaagtgtacagtgagactgaaaatgataatgagaaaaacct 533
Query: 415 gtgggcataagtgccttgctttcgaaaatgtttcatgacgtggctgtgggtcactgcatt 474
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 532 gtgggcataagtgccttgctttcgaaaatgtttcacgacgtggctgtgggtcactgcatt 473
Query: 475 gctgtttgtcgggtatagctggcatcctaattatgcaggagagccagagacttgcatcac 534
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 472 gctgtttgtcgggtatagctggcatcctaactatgcaggagagccagagacttgcatcac 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space: 634662
Effective search space used: 634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_j24.g1 MSMg01no531_j24.g1 CHROMAT_FILE:
MSMg01no531_j24.g1 PHD_FILE: MSMg01no531_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:18 2005
(695 letters)
>mm_chr14_100940299_100941393
Length = 1095
Score = 1315 bits (680), Expect = 0.0
Identities = 692/696 (99%), Gaps = 1/696 (0%)
Strand = Plus / Plus
Query: 1 attccaatgttttgaaaaagaaaggggaaaatgtttttattttattttgttttgtcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccaatgttttgaaaaagaaaggggaaaatgtttttattttattttgttttgtcaagg 260
Query: 61 gagatgaaatatctattatgggaagaacactgaactatgagagactttataggtcgatgg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggatgaaatatctattatgggaagaacactgaactatgagagactttataggtcgatgg 320
Query: 121 atggtctgatgtagacaaaatggagcagctaatcagattttgtacttcagtgtaagactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggtctgatgtagacaaaatggagcagctaatcagattttgtacttcagtgtaagactg 380
Query: 181 acatgtgggtacacatgataacttttatagtagattcctcattttttcctaaatgcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatgtgggtacacatgataacttttatagtagattcctcattttttcctaaatgcatgt 440
Query: 241 ttaactctcatgcgaaatttagaatacctttttttaaaaaacagtaaatgtatcttgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaactctcatgcgaaatttagaatacctttttttaaaaaacagtaaatgtatcttgaat 500
Query: 301 tgtgtccctcattttattctagaatttgtctgtgttttctgtcttcattctgggtttaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtccctcattttattctagaatttgtctgtgttttctgtcttcattctgggtttaat 560
Query: 361 tgctgtcttgtttgttaacttgactatatctggaattaacaaaaac-tcacacctgtgag 419
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 tgctgtcttgtttgttaacttgactatatctggaattaacaaaaaaatcacacctgtgag 620
Query: 420 ggacttttttccttatttaagtcatttgaagtgggaagacccacttttaatctggatatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggacttttttccttatttaagtcatttgaagtgggaagacccacttttaatctggatatc 680
Query: 480 ttttgaggtgaaaaaaatacaccattagtccaggtcttttgagattggaagatgaacctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttgaggtgaaaaaaatacaccattagtccaggtcttttgagattggaagatgaacctt 740
Query: 540 taatctggtccacacctcctgctgggagcctatatcaaatgcatggaagaaggaagcagt 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taatctggtccacatctcctgctgggagcctatatcaaatgcatggaagaaggaagcagt 800
Query: 600 ctttattccgttgccagtttgttcacactctccctggcacgtccatttcttcatgggcct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctttattccgttgccagtttgttcacactctccctggcacgtccatttcttcatgggcct 860
Query: 660 tagaatgtacttcttcaggaatctaacatatactga 695
||||||||||||||||||||||||||||||||||||
Sbjct: 861 tagaatgtacttcttcaggaatctaacatatactga 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
