Query= MSMg01no533_p12.b1 MSMg01no533_p12.b1 CHROMAT_FILE:
MSMg01no533_p12.b1 PHD_FILE: MSMg01no533_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:18 2005
(598 letters)
>mm_chr14_70843948_70844945
Length = 998
Score = 1067 bits (552), Expect = 0.0
Identities = 587/606 (96%), Gaps = 13/606 (2%)
Strand = Plus / Plus
Query: 4 ggaattccataggctgctagcattaaaatatttttgatgtactgtaatattgtgccacac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccataggctgctagcattaaaatatttttgatgtactgtaatattgtgccacac 263
Query: 64 aatagtgtattctttgtcggagacaaatgaccaatgggaggatatatatgtgcatattta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatagtgtattctttgtcggagacaaatgaccaatgggaggatatatatgtgcatattta 323
Query: 124 tatgtatatatcataacttgtttccttaatggggcacttaatttaaataggtatattgtt 183
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 324 tatgtatatatcgtaacttgtttccttaatggggcacttactttaaataggtatgttgtt 383
Query: 184 agaaatagctagtgtacatttgatacatccaacttttttgctttcttgtagattatatcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaaatagctagtgtacatttgatacatccaacttttttgctttcttgtagattatatcc 443
Query: 244 ctaggaaagagtttcagaaaatgtgcatattaaaagtatactttgctgggcagtggtggc 303
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 444 ctaggaaagagtttcagaaaatgtacatattaaaagtatactttgctgggcagtggtggc 503
Query: 304 acacgcctttaatcccagcacttgggaggcagaggcaggtggatttctgagtttgaggcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acacgcctttaatcccagcacttgggaggcagaggcaggtggatttctgagtttgaggcc 563
Query: 364 agcctggtctacagaatgagttccaggacagccagggctacacagagaaaccctgtctcg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agcctggtctacagaatgagttccaggacagccagggctacacagagaaaccctgtctcg 623
Query: 424 aaaaaccaaaataaataaataaaatgaaaatagtaaataaataaacttcattttgatgtc 483
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 aaaaaccaaaataaataaataaaatgaaaatagtaaataagtaaacttcattttgatgtc 683
Query: 484 atacatatgcagttatttaaaaaaaaaa-----------ggaaaaattatgtgacaagcc 532
|||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 684 atacatatgcagttatttaaaaaaaaaaaagggggggggggaaa--ttatgtgacaagcc 741
Query: 533 aggcatgttggtgcatgcctgtaaacccagaacttgggaggaaaaagcaggcaggtctct 592
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 742 aggcatgttggtgcatgcctgtaaacccagtacttgggaggaaaaagcaggcaggtctct 801
Query: 593 gagttt 598
||||||
Sbjct: 802 gagttt 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_p12.g1 MSMg01no533_p12.g1 CHROMAT_FILE:
MSMg01no533_p12.g1 PHD_FILE: MSMg01no533_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:18 2005
(545 letters)
>mm_chr14_71024700_71025645
Length = 946
Score = 882 bits (456), Expect = 0.0
Identities = 510/546 (93%), Gaps = 29/546 (5%)
Strand = Plus / Minus
Query: 1 ggatttagggtgggagtttcctctcctccccagatctgctgatccagctatatatacctc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 631 ggatttagggtgggagtttcctctcctccccagatctgccgatccagctatatatacctc 572
Query: 61 aggactcagatctataaggaacgtgtttggacaaagcaagcctgagcagtggagggacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aggactcagatctataaggaacgtgtttggacaaagcaagcctgagcagtggagggacct 512
Query: 121 agctagaaaagagaaacttacctcttctgaggaaagagcacagaaatggccactaactca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agctagaaaagagaaacttacctcttctgaggaaagagcacagaaatggccactaactcg 452
Query: 181 gtcaagaggggaacctaagaaaactctaatgagctcaggcatgtttgcaggggaggg-gg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 451 gtcaagaggggaacctaagaaaactctaatgagctcaggcatgtttgcaggggagggagg 392
Query: 240 caggagggggggtcaaagggaaaggagcactcttgtcactgagagtgggtaggcaggtcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caggagggggggtcaaagggaaaggagcactcttgtcactgagagtgggtaggcaggtcc 332
Query: 300 tggaacagatggactccgttatctactcctgaagctgcctgatcttgttcaatgggacag 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tggaacagacggactccgttatctactcctgaagctgcctgatcttgttcaatgggacag 272
Query: 360 gtgtcattcagagttggtatgaggaatgcatagtccaaagcaataggaaaaggatcagaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtgtcattcagagttggtatgaggaatgcatagtccaaagcaataggaaaaggatcagaa 212
Query: 420 agcatttgcatgagagagagagagagagggagagagagagagagagagagagagagagag 479
||||||||||| ||| |||||||||||||||||
Sbjct: 211 agcatttgcat----------------------------gagcgagagagagagagagag 180
Query: 480 agagagagagagagagagagagagaactagagaagagaaagtaacagggccttggtggcc 539
||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 179 agagaaagagagagagagagagaaaacaagagaagagaaagtaacagggccttggtggcc 120
Query: 540 tgagaa 545
||||||
Sbjct: 119 tgagaa 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space: 500760
Effective search space used: 500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
