Query= MSMg01no535_f01.b1 MSMg01no535_f01.b1 CHROMAT_FILE:
MSMg01no535_f01.b1 PHD_FILE: MSMg01no535_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:06 2005
(639 letters)
>mm_chr14_102668751_102669792
Length = 1042
Score = 1147 bits (593), Expect = 0.0
Identities = 630/643 (97%), Gaps = 5/643 (0%)
Strand = Plus / Plus
Query: 1 caggcaacaggaagggagtgagacactggacctgcttggacttttgaaacctcaaagccc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 caggcaacaggaagggagtgagacactggacctgcttgggcttttgaaacctcaaagccc 260
Query: 61 acaccccaccctctgatgcacttcttccaataatg-cctcgcctactccaataaggccaa 119
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 261 acaccccaccctctgatgcacttcttccaataa-gacctcgcctactccaataaggccaa 319
Query: 120 acctcctaatccttctaaagtaatgccattccccaatgaataagcactcaaatacatgag 179
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acctcctaatccttcttaagtaatgccattccccaatgaataagcactcaaatacatgaa 379
Query: 180 cctatggaggtcactcttattcaaacagcaagggtagaaagat--gattctgtacttaga 237
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 cctatggaggtcactcttattcaaacagcaagggtagaaagatatgattctgtacttaga 439
Query: 238 ggttaaggatctgaaaaccaatatacttagaaagagagcatgagcctgcattgtttgtac 297
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggttaaggatcttaaaaccaatatacttagaaagagagcatgagcctgcattgtttgtac 499
Query: 298 cacaaacataattcacacttttcacactctagattacactatcaacaatgtgttcctggt 357
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 cacaaacataattcacacttttcacactctagattacactatcaacaatgtgctcctggt 559
Query: 358 gggataattagcagcttgaaagaaaggtatttaaattgtagcttgaaggacaaaaatagc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gggataattagcagcttgaaagaaaggtatttaaattgtagcttgaaggacaaaaatagc 619
Query: 418 tagtttaaaatttgttggtaattagtaggtaaaataatggctttcacagaaaagaaaagc 477
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 620 tagtttaaaatttgttggtaattagtaggtaaaataatggctttcacggaaaagaaaagc 679
Query: 478 tataaaacacattttttt-ctaaacacctaaaaccaaagtgtgccttctaatcctttact 536
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tataaaacacattttttttctaaacacctaaaaccaaagtgtgccttctaatcctttact 739
Query: 537 cttataaccctgtggccagaaaaagacttaactctttgatagtcagctcctcagtattca 596
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 740 cttataaccccgtggccagaaaaagacttaactctttgatagtcagctcctcagtattaa 799
Query: 597 gattcagagaactattgggtcaggttagggaataatgtgtaca 639
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gattcagagaactattgggtcaggttagggaataatgtgtaca 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1042
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1032
Effective search space: 649128
Effective search space used: 649128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_f01.g1 MSMg01no535_f01.g1 CHROMAT_FILE:
MSMg01no535_f01.g1 PHD_FILE: MSMg01no535_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:06 2005
(686 letters)
>mm_chr14_102789640_102790725
Length = 1086
Score = 1249 bits (646), Expect = 0.0
Identities = 659/664 (99%), Gaps = 2/664 (0%)
Strand = Plus / Minus
Query: 1 actaggcgctaacaggtcctcagtgtgcctgaatttctaggacatatcccttgctgtccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 actaggcgctaacaggtcctcagtgtgcctgaatttctaggacatatcccttgctgtccc 605
Query: 61 acaagaagatacaacaggggtaatttttagatttccagggtgaaatgggggcacagttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acaagaagatacaacaggggtaatttttagatttccagggtgaaatgggggcacagttgt 545
Query: 121 gatttttgtattgaaaacttggaaatagggaaagatgttatccagtggcagaaatggatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gatttttgtattgaaaacttggaaatagggaaagatgttatccagtggcagaaatggatt 485
Query: 181 tgacttaccctgctcaagggccaggttgtgtttccccttctgttttatatgtaattctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgacttaccctgctcaagggccaggttgtgtttccccttctgttttatatgtaattctat 425
Query: 241 gaggtgaatattttatactactatggaggagacaagaggcacacagaaatattaagttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaggtgaatattttatactactatggaggagacaagaggcacacagaaatattaagttat 365
Query: 301 gtgttcaaggttgcacatcaaagatttatctgtcttttgtacgatgttttcattggaaaa 360
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtgttcaaggtagcatatcaaagatttatctgtcttttgtacgatgttttcattggaaaa 305
Query: 361 tattttataaagtgaaaaagtttagtgtaactgcaatctaaaaattaatcaatttctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tattttataaagtgaaaaagtttagtgtaactgcaatctaaaaattaatcaatttctggt 245
Query: 421 gatttgtttttctacttaataaaaaaggaaagggtaagggctcaagcccattggttaggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gatttgtttttctacttaataaaaaaggaaagggtaagggctcaagcccattggttaggc 185
Query: 481 cttgagtagcatgggcaaagccctggtttcaatccctagacccattcaagaaataaagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cttgagtagcatgggcaaagccctggtttcaatccctagacccattcaagaaataaagtg 125
Query: 541 atacgctatggttaatggaaaaagttaactcctgaagagaaaaaaaaaa--gataaaaat 598
|||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 124 atacgctatggttaatggaaaaagttaactcccgaagagaaaaaaaaaaaagataaaaat 65
Query: 599 aaaattagatcggtgacctaaatatattttctgaagttctttgggtttcagaaagcaatt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aaaattagatcggtgacctaaatatattttctgaagttctttgggtttcagaaagcaatt 5
Query: 659 ttat 662
||||
Sbjct: 4 ttat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
