Query= MSMg01no535_f17.b1 MSMg01no535_f17.b1 CHROMAT_FILE:
MSMg01no535_f17.b1 PHD_FILE: MSMg01no535_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:09 2005
(608 letters)
>mm_chr14_80765512_80766519
Length = 1008
Score = 1152 bits (596), Expect = 0.0
Identities = 602/604 (99%)
Strand = Plus / Minus
Query: 5 gaattctgtgaccagaagggcatggcaacatcttgggatataagtaataaaataactaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gaattctgtgaccagaagggcatggcaacatcttgggatataagtaataaaataactaat 749
Query: 65 taataaagtatagtagaatatttcaaaccatttaaactgaataccatcctctactcggtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 taataaagtatagtagaatatttcaaaccatttaaactgaataccatcctctactcggtt 689
Query: 125 atcttctaaggttataaatggatattttatttgataattaaagacatggtgttttgagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 atcttctaaggttataaatggatattttatttgataattaaagacatggtgttttgagtt 629
Query: 185 ttcaaaaagtttgtagtaagtgtctacaggtgactatgaagatatacatttcaaaatatt 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 628 ttcaaaaagtttgtagtaagtgtctacaggtaactatgaagatatacatttcaaaatatt 569
Query: 245 acttagtaattcacaatagaagtaaaagtaggaaataaagcatcggtaggtcatacacca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 acttagtaattcacaatagaagtaaaagtaggaaataaagcatcggtaggtcatacacca 509
Query: 305 aaaatgaaatatatactgcattattcacattattcattatattgtataaatggaataaat 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 508 aaaatgaaatatatactgcattattcacattattcattatattgtataaatggaataagt 449
Query: 365 aagctcaccctttcttgcacattacaaatattgcaaaggtaaaacttagcctctaaagct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aagctcaccctttcttgcacattacaaatattgcaaaggtaaaacttagcctctaaagct 389
Query: 425 caaggtatggcttatgtttcctaagatgacatttccaaatagaaattccttcacctattt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caaggtatggcttatgtttcctaagatgacatttccaaatagaaattccttcacctattt 329
Query: 485 caaatcatctatttgtgtactagtctcaatatcccaggacacagatcctgacatagcctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caaatcatctatttgtgtactagtctcaatatcccaggacacagatcctgacatagcctg 269
Query: 545 attgacttggtaatagaggatgcaaagcaaagagttggaaatagtcatttgactatgtgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 attgacttggtaatagaggatgcaaagcaaagagttggaaatagtcatttgactatgtgg 209
Query: 605 ttca 608
||||
Sbjct: 208 ttca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_f17.g1 MSMg01no535_f17.g1 CHROMAT_FILE:
MSMg01no535_f17.g1 PHD_FILE: MSMg01no535_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:09 2005
(450 letters)
>mm_chr14_80602211_80603062
Length = 852
Score = 804 bits (416), Expect = 0.0
Identities = 443/452 (98%), Gaps = 2/452 (0%)
Strand = Plus / Plus
Query: 1 ggattcttgtttgtgggtatatctgtggtcgctgagtaaaaagcatgatgcatcctggcc 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggatccttgtttgtgggtatatctgtggtcgctgagtaaaaagcatgatgcatcctggcc 260
Query: 61 ctctttttcacctatgctgtggccaataaaaaa-tgtacgtggcttctatgaaatctcct 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 ctctttttcacctatgctgtggccaataaaaaaatgtacgtggcttctatgaaatctcct 320
Query: 120 tacaggggaatacttttgggaggctttgaccttttcctctcttgtattgtggaagtaatg 179
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 321 tacaggggaatacttttgggaggctttgaccttttcctctcctggattgtggaagtaatg 380
Query: 180 gtagaatatgaagcattttttttt-gagactgaggcaatactctaaggatggtggattgt 238
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gtagaatatgaagcattttttttttgagactgaggcaatactctaaggatggtggattgt 440
Query: 239 gggttctggcactgtgggaatcactatatgagctttgagaattattctgcatgaacgaat 298
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gggttctggcactgtgggaatcactgcatgagctttgagaattattctgcatgaacgaat 500
Query: 299 accaatttccatccattttaagtgattgcatttgaattttttctgtcacaaataacaaaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accaatttccatccattttaagtgattgcatttgaattttttctgtcacaaataacaaaa 560
Query: 359 ttactcacaaatgcaatgttcaatcacaaaaggatggttaaattatggaattctatgcta 418
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 ttactcacaaatgcaatgttcaatcacaaaaggatggttaaattatggaatgctatgcta 620
Query: 419 tacgcgcatgtgctttatatggtataatccca 450
|||||||||||||||| |||||||||||||||
Sbjct: 621 tacgcgcatgtgctttttatggtataatccca 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 852
Length adjustment: 10
Effective length of query: 440
Effective length of database: 842
Effective search space: 370480
Effective search space used: 370480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
