Query= MSMg01no536_h15.b1 MSMg01no536_h15.b1 CHROMAT_FILE:
MSMg01no536_h15.b1 PHD_FILE: MSMg01no536_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:35 2005
(606 letters)
>mm_chr14_16142945_16143950
Length = 1006
Score = 1133 bits (586), Expect = 0.0
Identities = 598/602 (99%)
Strand = Plus / Plus
Query: 5 gaatgaaccgacagacatcagaaggtttagtagggtacaaagagtgatccaaaagtaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatgaaccgacagacatcagaaggtttagtagggtacaaagagtgatccaaaagtaaat 264
Query: 65 tattataataattttctacacattaatatttaaggtcaggaacatttatagaatcttgag 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 tattataataattttctacacattaatatttaaggtcaggagcatttatagaatcttgag 324
Query: 125 aaggttgattgctcgtcatggtttgggtagttcatgtattgtcttgggaaaataaactct 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggttgattgctagtcatggtttgggtagttcatgtattgtcttgggaaaataaactct 384
Query: 185 gatactcacatttcagtcaactgatctattaatgtgagttttaaaccaggcacagatggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatactcacatttcagtcaactgatctattaatgtgagttttaaaccaggcacagatggt 444
Query: 245 ctcataacattaaaacaaaacatgttaacccccaaaatataaaagcaagtagttatgcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcataacattaaaacaaaacatgttaacccccaaaatataaaagcaagtagttatgcag 504
Query: 305 aaaataaatctcacagatgttcctggtgctgtgggcatagctggaacattcagatatgaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaataaatctcacagatgttcctggtgctgtgggcatagctggaacattcagatatgaa 564
Query: 365 aggagatgaggtcagtgagtgggatgactcaagtcagctgggaagaccaaagcacagccg 424
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggagatgaggtcactgagtgggatgactcaagtcagctgggaagaccaaagcacagccg 624
Query: 425 aggggattcactctttcctccaggagtcgagtttcatatcgttgagccaaactgaacagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aggggattcactctttcctccaggagtcgagtttcatatcgttgagccaaactgaacagc 684
Query: 485 catccagctggaatgtgatacataatccaggtctttctcagaacaagatagctcctaaag 544
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cattcagctggaatgtgatacataatccaggtctttctcagaacaagatagctcctaaag 744
Query: 545 gtccatccataatgtcatctaaaagcttggtgcatgatcacagactccaaccctactgag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gtccatccataatgtcatctaaaagcttggtgcatgatcacagactccaaccctactgag 804
Query: 605 cc 606
||
Sbjct: 805 cc 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_h15.g1 MSMg01no536_h15.g1 CHROMAT_FILE:
MSMg01no536_h15.g1 PHD_FILE: MSMg01no536_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:35 2005
(483 letters)
>mm_chr14_16199959_16200842
Length = 884
Score = 590 bits (305), Expect = e-173
Identities = 318/323 (98%), Gaps = 3/323 (0%)
Strand = Plus / Minus
Query: 1 atgaacaagaagaactctgaaatctttt-ggggatattgtgaccattagatcatgtagga 59
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 atgaacaagaagaactctgaaatcttttgggggatattgtgaccattagatcatgtagga 262
Query: 60 ctgcaacaaaatattctgaagtggcattttttgcttagtatctagtgttcacttagaagt 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcaacaaaatgttctgaagtggcattttttgcttagtatctagtgttcacttagaagt 202
Query: 120 gtgtcctagttggagtctctgttgctgtgctgaaactgtgactaatagcaagttgggaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgtcctagttggagtctctgttgctgtgctgaaactgtgactaatagcaagttgggaag 142
Query: 180 gaacagggtttttttttggcttatagatctgcatcttacttgattattgaaggacagtaa 239
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gaacaggg--tttttttggcttatagatctgcatcttacttgattattgaaggacagtaa 84
Query: 240 ctcaaacaaggcaggaacctggagacaggagctgaagcaaagaccatggaggaggccctg 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 83 ctcaaacaaggcaggaacctggagacaggaactgaagcaaagaccatggaggaggccctg 24
Query: 300 gttcttggcttgcccttcatggt 322
|||||||||||||||||||||||
Sbjct: 23 gttcttggcttgcccttcatggt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 884
Length adjustment: 10
Effective length of query: 473
Effective length of database: 874
Effective search space: 413402
Effective search space used: 413402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
