Query= MSMg01no537_g13.b1 MSMg01no537_g13.b1 CHROMAT_FILE:
MSMg01no537_g13.b1 PHD_FILE: MSMg01no537_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:46 2005
(548 letters)
>mm_chr14_13719668_13720614
Length = 947
Score = 1000 bits (517), Expect = 0.0
Identities = 538/545 (98%), Gaps = 1/545 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttatgtattctgaatatcaatccattaacagatctatgagttcaacttgttt 63
||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 747 ggaattctttatgtattttgaatatcaatccattatcagatctatgcgttcaacttgttt 688
Query: 64 acttaatgactgccagatacttaactatttatggataaaaatctagatctctttaattgc 123
||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 687 acttaatgactaccagatactcaactatttatggat-aaaatctagatctctttaattgc 629
Query: 124 tcctagagtttgcaatgtctttgccagctaaaacccctaattgtcactgcttctaataac 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tcctagagtttgcagtgtctttgccagctaaaacccctaattgtcactgcttctaataac 569
Query: 184 agggtcaacattagcatcatttactcctaggctgttgaagcagactcctcacttacctcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agggtcaacattagcatcatttactcctaggctgttgaagcagactcctcacttacctcc 509
Query: 244 atcccaccactctaaggccaccatccatcttgaacagagaattctatcccaagttgcttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atcccaccactctaaggccaccatccatcttgaacagagaattctatcccaagttgcttg 449
Query: 304 gtaggactgaaatagaattttgagtacctgccctctgcaaatttagacttggaagcttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtaggactgaaatagaattttgagtacctgccctctgcaaatttagacttggaagcttta 389
Query: 364 atcctccatgaaataggaggatgtggggatggggcaaccatggtgggatcagtgccatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atcctccatgaaataggaggatgtggggatggggcaaccatggtgggatcagtgccatga 329
Query: 424 taggaagaaaccaaaaatattttatcacccttaatcccatcataaagtaacctgagaaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 taggaagaaaccaaaaatattttatcacccttaatcccatcataaagtaacctgagaaag 269
Query: 484 cctaactcttgggtgatttttactatattaacaaaatacagaagtgaaaacatgtgagat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cctaactcttgggtgatttttactatattaacaaaatacagaagtgaaaacatgtgagat 209
Query: 544 gagaa 548
|||||
Sbjct: 208 gagaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 947
Length adjustment: 10
Effective length of query: 538
Effective length of database: 937
Effective search space: 504106
Effective search space used: 504106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_g13.g1 MSMg01no537_g13.g1 CHROMAT_FILE:
MSMg01no537_g13.g1 PHD_FILE: MSMg01no537_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:46 2005
(443 letters)
>mm_chr14_13533738_13534580
Length = 843
Score = 824 bits (426), Expect = 0.0
Identities = 435/438 (99%)
Strand = Plus / Plus
Query: 1 tgtactgatgaagaactcattattaggaatgtaaatgtacctatagttgtctctattaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtactgatgaagaactcattattaggaatgtaaatgtacctatagttgtctctattaga 260
Query: 61 attctatagtgaattcagtattagagatgtaaaggcatctatagattgtctctatccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctatagtgaattcagtattagagatgtaaaggcatctatagattgtctctatccagc 320
Query: 121 tcttccagatttatctgcaaacactgtagaaatttacagatgacaaatgtcatttcctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttccagatttatctgcaaacactgtagaaatttacagatgacaaatgtcatttcctga 380
Query: 181 tagtgggaacatgaatgttattgtcactgcccatcgagcacaggccaaaggcatgctgcc 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tagtgggaacatgaatgttattgtcactgcccatcgagcacaggtcaaaggcatgctgcc 440
Query: 241 tctgaaggctctgcttgttaacctatgtgtggcatttttcaaatatcagaattaaagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgaaggctctgcttgttaacctatgtgtggcatttttcaaatatcagaattaaagcca 500
Query: 301 aaggaaacatctttcctcatccatgtctcttcaactttagctggcttatattctttctaa 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 aaggaaacatctttcctcatccatgtctcttcaactttagctggcttaaattctttctaa 560
Query: 361 cacataactccatggtggttttcttttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 cacataactccatggtggttttcttttggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 620
Query: 421 gtgtgtgtgtgtgtgtgt 438
||||||||||||||||||
Sbjct: 621 gtgtgtgtgtgtgtgtgt 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
