XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATA
AGTCAAGGGATCTACAAATATACTGGGATAACATTGTTTAATTCACTGAA
AAAATTATTTTAGTTCCAAAGCTAAGTCAGCCATATGTCCTGGATTTTCC
AGGACTCTGCTGATTTAAAATATTTTGTCTTACCAGGCCATGTGTCAGAA
CACAGCCCACAGCCCATTTAAGGTTAGAAAAATTGTGTTACCATAACCTC
ATTCCATCCCACATGCCATATTGTTTTTTTCAAATAAATGGTGACCTTGT
TTCTGGTGGGTATCCTACACAGAAAACAATCTTGGTTTGTGAGCTTGCAA
TGTATGCTTATGAATATTCAAATGCACAACTCCAATTAAAATAAGAGCTG
AAAGTCTGTGCTACAGGCAAGAAAAAAATACTCTGCTCATAGCTGCATTT
GCTTTACTAACAACAGGTTGTAGCCTGACAGCCTGAGGGTAAAAATAATT
AATGTTTTGTTCTTACCTTGTTATCATACGTCTAATGAATCATATTTTGA
TTTTGCTTTACATTTGTTGAAGAGCCATAGACAGGTCCAATATAACAGAA
GAAGCTGCAACTTTTTTGTCCAGTTCAGATGAGCACTGCTATATTTAGGA
GCATTATATAGCTCAGTCTTTACAGAGAGATAAATGCCAGGAAGCCCATT
CCAACTAAGAAGAATTTAAGAAGTATCTCAAACTT

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXACCTGCTAAATTCTAGAAATCAAAGACAGATAAA
ACGAAATGGATTTTCTCCAACACCGCCTTTAAGGGAGAGGATGCCACTAC
ATGTAAAATTCCCCCATTAGTTCCATTTATTTCACTTATTTTCTGCTTTG
CTGGACCTTAGGTAACCATCACAATGTTGTGTGCCAGTCTTAAAGTCAGT
CTGGAACAGCCTGACAGATAGCCTTCTTCTGATCTTTTATCTAGAAGTCT
AAATTCATGGTCTGAAGCTTGTACATGGGACTTTTGTGATAGTTTGGGGG
AGGGGCCATTTTGCTTACATATAAGAATGGCTTGGTCAGTAGCTATGTCA
AAGAATAAGGCACTGTCAATTTTGAAGGCGGCTAGAAGCATTTACTCCAG
GCTCATTCAGCAGGGAAGAAAGGCTCTTCTAGCAACTGCCAGCTGTCCTT
TAGTCCAGTTTTCTGGTAAGTTCTTGTTGCCACATAGAAACTCACAGTAA
CCAGCAGAAAAGGAACAGAAGTGAATGTAATCCATAGAAGGATATGTGTC
CCTGTTTCACTGATTACTCTGAGGAAAAAAAAACAATTTATTCAGGACAC
TAGCAATTTTCCAGGACTTTCTAGTCCAATAAGAAAAGAATATTTAAATA
CAAGGATGCTTGAAAATCTAGGGATAAAAATTTTAAATCCAA

Query= MSMg01no538_a03.b1 MSMg01no538_a03.b1 CHROMAT_FILE:
MSMg01no538_a03.b1 PHD_FILE: MSMg01no538_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:33 2005
         (691 letters)



>mm_chr14_123631492_123632582
          Length = 1091

 Score = 1313 bits (679), Expect = 0.0
 Identities = 685/687 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcataagtcaagggatctacaaatatactgggataacattgtttaattcactgaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gaattcataagtcaagggatctacaaatatactgggataacattgtttaattcactgaaa 832

                                                                       
Query: 65  aaattattttagttccaaagctaagtcagccatatgtcctggattttccaggactctgct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aaattattttagttccaaagctaagtcagccatatgtcctggattttccaggactctgct 772

                                                                       
Query: 125 gatttaaaatattttgtcttaccaggccatgtgtcagaacacagcccacagcccatttaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gatttaaaatattttgtcttaccaggccatgtgtcagaacacagcccacagcccatttaa 712

                                                                       
Query: 185 ggttagaaaaattgtgttaccataacctcattccatcccacatgccatattgtttttttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ggttagaaaaattgtgttaccataacctcattccatcccacatgccatattgtttttttc 652

                                                                       
Query: 245 aaataaatggtgaccttgtttctggtgggtatcctacacagaaaacaatcttggtttgtg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaataaatggtgaccttgtttctggtgggtatcctacacagaaaacaatcttggtttgtg 592

                                                                       
Query: 305 agcttgcaatgtatgcttatgaatattcaaatgcacaactccaattaaaataagagctga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agcttgcaatgtatgcttatgaatattcaaatgcacaactccaattaaaataagagctga 532

                                                                       
Query: 365 aagtctgtgctacaggcaagaaaaaaatactctgctcatagctgcatttgctttactaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aagtctgtgctacaggcaagaaaaaaatactctgctcatagctgcatttgctttactaac 472

                                                                       
Query: 425 aacaggttgtagcctgacagcctgagggtaaaaataattaatgttttgttcttaccttgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aacaggttgtagcctgacagcctgagggtaaaaataattaatgttttgttcttaccttgt 412

                                                                       
Query: 485 tatcatacgtctaatgaatcatattttgattttgctttacatttgttgaagagccataga 544
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tatcatacatctaatgaatcatattttgattttgctttacatttgttgaagagccataga 352

                                                                       
Query: 545 caggtccaatataacagaagaagctgcaacttttttgtccagttcagatgagcactgcta 604
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 351 caggtccaatataacagaagaagctgcaacttttttgtccggttcagatgagcactgcta 292

                                                                       
Query: 605 tatttaggagcattatatagctcagtctttacagagagataaatgccaggaagcccattc 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tatttaggagcattatatagctcagtctttacagagagataaatgccaggaagcccattc 232

                                      
Query: 665 caactaagaagaatttaagaagtatct 691
           |||||||||||||||||||||||||||
Sbjct: 231 caactaagaagaatttaagaagtatct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space:   736161
Effective search space used:   736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no538_a03.g1 MSMg01no538_a03.g1 CHROMAT_FILE:
MSMg01no538_a03.g1 PHD_FILE: MSMg01no538_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:33 2005
         (624 letters)



>mm_chr14_123457076_123458099
          Length = 1024

 Score = 1122 bits (580), Expect = 0.0
 Identities = 613/624 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctgctaaattctagaaatcaaagacagataaaacgaaatggattttctccaacaccgc 60
           ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||
Sbjct: 201 acctgctaaattctagaaatcaaagacagatgaaatgaaagggattttctccaacactgc 260

                                                                       
Query: 61  ctttaagggagaggatgccactacatgtaaaattcccccattagttccatttatttcact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttaagggagaggatgccactacatgtaaaattcccccattagttccatttatttcact 320

                                                                       
Query: 121 tattttctgctttgctggaccttaggtaaccatcacaatgttgtgtgccagtcttaaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttctgctttgctggaccttaggtaaccatcacaatgttgtgtgccagtcttaaagt 380

                                                                       
Query: 181 cagtctggaacagcctgacagatagccttcttctgatcttttatctagaagtctaaattc 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtctggaacagccagacagatagccttcttctgatcttttatctagaagtctaaattc 440

                                                                       
Query: 241 atggtctgaagcttgtacatgggacttttgtgatagtttgggggaggggccattttgctt 300
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggtctgaagcttgtatgtgggacttttgtgatagtttgggggaggggccattttgctt 500

                                                                       
Query: 301 acatataagaatggcttggtcagtagctatgtcaaagaataaggcactgtcaattttgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 acatataagaatggcttggtcagtagctatgtcaaagaataaggcactgccaattttgaa 560

                                                                       
Query: 361 ggcggctagaagcatttactccaggctcattcagcagggaagaaaggctcttctagcaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcggctagaagcatttactccaggctcattcagcagggaagaaaggctcttctagcaac 620

                                                                       
Query: 421 tgccagctgtcctttagtccagttttctggtaagttcttgttgccacatagaaactcaca 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 tgccagctgtcctttagtccagttttctggtaagttcgtgttgccacatagaaactcaca 680

                                                                       
Query: 481 gtaaccagcagaaaaggaacagaagtgaatgtaatccatagaaggatatgtgtccctgtt 540
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 gtaaccagcagaaaaggaacagaagtgaatgtaatccatagaaggatacgtgtccctgtt 740

                                                                       
Query: 541 tcactgattactctgaggaaaaaaaaacaatttattcaggacactagcaattttccagga 600
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 tcactgattactctgaggaaaaaaaaccaatttattcaggacactagcaattttccagga 800

                                   
Query: 601 ctttctagtccaataagaaaagaa 624
           ||||||||||||||||||||||||
Sbjct: 801 ctttctagtccaataagaaaagaa 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)