MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-539L07
Chromosome	14 (Build37)
Map Location	59,483,232 - 59,483,627
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
Downstream gene	EG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46, Atp8a2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Zdhhc20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75965 MGI:1923215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Efha1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68514 MGI:1915764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	Fgf9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14180 MGI:104723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043554 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs

name	EG668177 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668177 MGI:3643783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins pseudo : _no_value

name	EG668182 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668182 MGI:3646682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 725 ESTs, 11 Proteins

name	1700129C05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67932 MGI:1915182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG380907 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380907 MGI:3647352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rcbtb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71330 MGI:1918580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628693 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628693 MGI:3644962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins

name	Phf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219131 MGI:1918441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG236451 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236451 MGI:3645789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins

name	D14Ertd668e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219132 MGI:1277133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628705 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628705 MGI:3648476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	Setdb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239122 MGI:2685139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cab39l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69008 MGI:1914081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdadc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71891 MGI:1919141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem46 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219134 MGI:2444716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp8a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50769 MGI:1354710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719323 GeneID:75965 MGI:1923215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 20 transcript_id : NM_029492.4

name	Efha1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802390 GeneID:68514 MGI:1915764
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EF hand domain family A1 transcript_id : NM_028643.2

name	Fgf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371104 GeneID:14180 MGI:104723
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor 9 transcript_id : NM_013518.3

name	LOC100043554 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265763 GeneID:100043554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs product : hypothetical protein LOC100043554 transcript_id : XM_001480314.1

name	EG668182 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265765 GeneID:668182 MGI:3646682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 725 ESTs, 11 Proteins product : predicted gene, EG668182 transcript_id : XM_994790.2

name	EG380907 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363123 GeneID:380907 MGI:3647352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG380907 transcript_id : NM_001004158.2

name	Rcbtb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037240 GeneID:71330 MGI:1918580
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 transcript_id : NM_027764.1

name	EG628693 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265766 GeneID:628693 MGI:3644962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins product : predicted gene, EG628693 transcript_id : XM_893456.3

name	Phf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351633 GeneID:219131 MGI:1918441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 11 transcript_id : NM_172603.2

name	EG236451 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265767 GeneID:236451 MGI:3645789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins product : predicted gene, EG236451, transcript variant 1 transcript_id : XM_135671.8

name	D14Ertd668e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362087 GeneID:219132 MGI:1277133
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 14, ERATO Doi 668, expressed transcript_id : NM_199015.2

name	EG628705 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265629 GeneID:628705 MGI:3648476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : predicted gene, EG628705 transcript_id : XM_893468.3

name	Setdb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486619 GeneID:239122 MGI:2685139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain, bifurcated 2 transcript_id : NM_001081024.1

name	Cab39l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378328 GeneID:69008 MGI:1914081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium binding protein 39-like transcript_id : NM_026908.3

name	Cdadc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801958 GeneID:71891 MGI:1919141
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytidine and dCMP deaminase domain containing 1 transcript_id : NM_027986.2

name	Tmem46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803556 GeneID:219134 MGI:2444716
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 46 transcript_id : NM_145463.4

name	Atp8a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131094 GeneID:50769 MGI:1354710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 transcript_id : NM_015803.2

name	Zdhhc20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719324 CCDS:CCDS27162.1 GeneID:75965 MGI:1923215
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : DHHC-containing protein 20 protein_id : NP_083768.4

name	Efha1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477043 CCDS:CCDS27163.1 GeneID:68514 MGI:1915764
definition	codon_start : 1 product : Smhs2 homolog protein_id : NP_082919.1

name	Fgf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625633 CCDS:CCDS27164.1 GeneID:14180 MGI:104723
definition	GO_function : GO:0005104 - fibroblast growth factor receptor binding [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP] [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IDA]; GO:0008584 - male gonad development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0050679 - positive regulation of epithelial cell proliferation [Evidence IDA]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IDA]; GO:0045880 - positive regulation of smoothened signaling pathway [Evidence IDA] [Evidence IMP]; GO:0006606 - protein import into nucleus [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : glia activating factor product : fibroblast growth factor 9 protein_id : NP_038546.2

name	LOC100043554 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265764 GeneID:100043554
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480364.1

name	EG668182 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397192 GeneID:668182 MGI:3646682
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999884.1

name	EG380907 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921319 CCDS:CCDS27167.1 GeneID:380907 MGI:3647352
definition	codon_start : 1 product : hypothetical protein LOC380907 protein_id : NP_001004158.1

name	Rcbtb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037241 CCDS:CCDS27168.1 GeneID:71330 MGI:1918580
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein_id : NP_082040.1

name	EG628693 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397194 GeneID:628693 MGI:3644962
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898549.2

name	Phf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369858 CCDS:CCDS27169.1 GeneID:219131 MGI:1918441
definition	GO_function : GO:0008800 - beta-lactamase activity [Evidence IEA] GO_process : GO:0030655 - beta-lactam antibiotic catabolism [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA] codon_start : 1 product : PHD finger protein 11 protein_id : NP_766191.1

name	EG236451 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51768467 GeneID:236451 MGI:3645789
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_135671.3

name	D14Ertd668e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841029 CCDS:CCDS27170.1 GeneID:219132 MGI:1277133
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC219132 protein_id : NP_950180.1

name	EG628705 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265630 GeneID:628705 MGI:3648476
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898561.2

name	Setdb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486620 GeneID:239122 MGI:2685139
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0018024 - histone-lysine N-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA] codon_start : 1 product : SET domain, bifurcated 2 protein_id : NP_001074493.1

name	Cab39l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541826 CCDS:CCDS27171.1 GeneID:69008 MGI:1914081
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : calcium binding protein 39-like protein_id : NP_081184.3

name	Cdadc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625890 GeneID:71891 MGI:1919141
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 product : cytidine and dCMP deaminase domain containing 1 protein_id : NP_082262.1

name	Tmem46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703918 CCDS:CCDS27173.1 GeneID:219134 MGI:2444716
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 46 protein_id : NP_663438.1

name	Atp8a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7656912 CCDS:CCDS27174.1 GeneID:50769 MGI:1354710
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA] codon_start : 1 note : ATPase, class 1, member a; ATPase 8A2, p type; ATPase 8A2, class I product : ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 protein_id : NP_056618.1

name	LOC668160 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265626 GeneID:668160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to High mobility group box 1 pseudo : _no_value transcript_id : XR_034000.1

name	EG668177 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94397190 GeneID:668177 MGI:3643783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins product : predicted gene, EG668177 pseudo : _no_value transcript_id : XR_002153.1

name	1700129C05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149265367 GeneID:67932 MGI:1915182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700129C05 gene transcript_id : XR_035476.1

clone name	MSMg01-444A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316M08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-540L05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-116I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083K04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-087K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142J03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-539L07.T7 (MSMg01no539_l07.b1)	MSMg01-539L07.TJ (MSMg01no539_l07.g1)
ACC	AG606133	AG606134
length	1,321	780
length of high quality (start - end)	---	390 (80 - 469)
definition	CHROMAT_FILE: MSMg01no539_l07.b1 PHD_FILE: MSMg01no539_l07.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:18:45 2005	CHROMAT_FILE: MSMg01no539_l07.g1 PHD_FILE: MSMg01no539_l07.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:18:45 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GGAAACTCTTATTTATAAACCAACGCCGGCAAGAAGAGAGACCGCCCTCT CCCGNAAAGCACGTTTCGCGCTAAAATATCAACATATTTTCATATGCGTA CGAGATCTGTNAAGTTGGAACTGGCGTGTCGCTACTGACCTCGTGCGCGT GGCCTTCGCGTAGCGGCTGTGGCGCGCGGCGCCGCGGAGTAGGTATGTGT ATATGGCGGCGCACGNGCGCTCTTCTCGTCGCGTTCGATCCTGAACACAA NCTCATACTATATGTTTACATGAACAAATTTGTCGCGATAATTATGCGGA GAAAGCTATGATCTGGCGGGAGAGGTGGCGTGCGGGTCGTGGCGCGGCGT TAGATACGTGCACGTGGTGTCTTATTGTAGCCGGCGTTGCGGAGAGAAAA CACCCGCCGCGGCGCTACGTTTATAATGTATATGATTTATTAGTGCACGG CTGCGGCTGTTACTTCAGAAGCGATAGCGATCTATACTTTTTATACAGGC GAGTCTTGTATATATTGTGCCACACGTCGTAGCAATATTAGAGAGCGGGA CATGACAGGCATACGCGNGCGGAGAGTCGTACCCACTTTGTCGCGCGGGG TATGGCTCAGGTATGGAGGAGCATTGTCGACGTGACCCACCCCACAGCCG TGTTTTTATCGGCGGGCGGCGCGTGAGTANCCACGCCACGATTAATGTGC ATGTTGAGCCAGTCATTTAGCAACCAGCTACTATAGTAGACTGTATCTAT CGACNGTGTAATACTTGCTCGTGTCGTAGCCTTGCATACTATATATTTCG AGACTATACTTCGCGCACTCACCACGCGCGTTCGCGTGTTGGTGATCGTG TCAGCCTAGTACGTGTACGCTCTGTGTGCTATTATTCGTAGAGATGGTGA TATGTATACTCGTCGANCACAGTATCGATAGGACAGCGAACTCAGAATTG AGCAATTGTAGAGTTAGTGCACTGTACTATCCGGACGCATGAGTAGTAAT GTAGTAATGGATGCAATACGAATACGATGCGCGTCTCACGGCGCAATACG CCACGCAATACATCTGCTACGTATGATCCAATTTTATATATCGGTGAGCG GACACGCGGAGGCTTGGTTTGGCGCGTCTGTTATCGACAAGACATCTCCT CTTTTCGATACGTTATATGATACCAGCGCGACGGCGCCAGATATTATAAA CAATTAATTATACGACTTACCGTGCGTCACATTCGACTGGANCGTGACGA GATACTGTGGTTATCAGATAACTACACATATTCTCGCTCACATATTAGCT GTATTAACGTATGTTTGTATN	CTTTTTATTGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATATCAGGCCATTCTTGGAAT TAAGGTGTAGGTGATATAAGTCAGAGAACTTCTCCATCTTAAGCTTGCAG TGGAGGAGGAAGTCCAGTTTTTTTTTCCCTTTAGATTGAAAAGTTAGACA TTACTATTGGAGCTAATTTATACAGAAGATATCTGCTGTTTCTATTAGCA GTGAGTAGTATGGTGGGAGTTCACCAGTAAACAGGACACGCATTGCCTGC CCTTCCGACATTTACATTCTTGGGAGAGGAGAAAGACATTACTAAGAGGA AGGGGGAATTTACAGCGTGCCAGATAGTGATGTATGCAAGATCGAGCTGT GACTTTGAACTTTGGAGTGATAGGAGCAGAGATAGATTTCAAGCTACAAG GCTTTAAGAGACTCCTAATCAAGTGAGGGTGGGTTGGGAATGAATCATAT CAGAGTTGGGAACCTTGACTTGCTCAGTTCTTTTCTACTTTTTCTAAGTT AGAAAAACTTTTTATCTTTTCTAATGTCCGTTTCTTATATTTCCTCTACT CCCATGATATTTGCGTTTTACTTTCGCCTGCTTTTACTTTTCTTGCTCCT TTAATTTACCCTCCATAGAGATTCCTTTTACTCCTTTCTTTCCTATTCTC TTTGGGTCCTTAGATACTGTTGTTCTCTATTTATATTACACGGTTTTCTT TCCTCATATTTTTCCTTTCCTTCTTTCCCC
quality values	Open. Hide. 6 6 7 7 6 6 6 8 6 6 6 6 6 6 8 10 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 6 6 7 7 7 7 8 8 8 6 6 6 6 6 6 8 8 8 8 8 9 3 0 3 9 9 9 9 9 9 10 10 10 9 10 10 10 10 10 10 10 8 8 8 6 7 10 7 7 8 7 7 7 7 11 12 11 10 8 8 8 8 8 8 8 6 6 6 6 6 8 8 8 10 10 10 9 3 0 3 8 6 6 6 6 8 8 9 9 9 10 9 6 6 6 6 8 6 8 8 8 8 10 10 10 10 11 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 10 11 13 15 12 10 10 13 15 10 10 10 10 8 8 8 8 8 6 6 6 6 8 8 10 8 8 8 8 9 9 8 9 9 8 8 8 8 8 8 6 6 6 6 8 8 10 8 8 8 8 8 8 6 6 6 6 6 3 0 3 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 8 10 8 8 8 8 9 9 9 9 8 8 8 10 8 8 8 3 0 3 8 8 12 8 8 8 8 6 6 8 8 11 10 8 8 6 6 6 6 6 8 8 8 6 10 6 6 8 8 8 8 7 7 8 8 10 10 10 8 8 8 8 8 8 8 8 8 7 7 8 10 6 6 8 8 11 6 6 7 6 8 8 8 6 6 8 8 13 10 6 6 6 6 6 8 6 6 6 6 6 6 6 8 8 10 8 6 6 6 6 6 10 10 10 12 10 8 8 8 8 8 8 8 6 6 6 8 8 9 10 10 10 8 8 8 8 8 8 8 9 12 11 8 8 8 8 8 8 8 6 6 8 8 9 9 10 10 10 12 12 8 6 6 7 7 12 8 8 8 8 8 8 7 7 6 8 6 6 6 6 6 6 8 6 6 8 8 8 10 10 14 16 10 8 8 6 6 8 6 6 6 8 8 8 12 9 8 10 8 8 8 7 8 6 6 6 6 6 6 6 8 8 8 8 8 10 10 8 8 6 6 8 6 8 10 6 6 6 6 8 8 8 8 7 7 6 6 8 8 8 8 8 8 8 9 10 11 13 15 12 6 6 6 6 6 6 9 8 8 8 9 11 8 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 6 6 8 6 6 6 6 6 6 8 8 8 8 6 8 6 6 6 6 7 8 10 10 8 8 8 8 8 8 8 8 11 12 8 8 6 6 8 6 6 8 3 0 3 9 10 9 9 10 11 13 10 8 8 8 8 8 6 6 6 6 7 7 10 8 8 8 8 10 8 9 12 15 16 8 8 7 7 7 7 8 8 8 8 10 8 8 8 8 8 8 8 10 8 8 8 6 6 6 6 6 8 8 8 10 10 10 10 10 10 8 10 8 8 8 8 12 8 8 6 6 6 6 8 8 8 8 8 8 8 8 6 6 6 6 7 7 10 10 10 8 10 7 10 16 10 10 10 10 10 10 10 11 3 0 3 6 6 6 6 8 6 6 6 6 8 8 8 8 8 8 12 12 9 6 6 8 8 10 8 8 8 8 8 10 10 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 11 9 10 10 10 8 8 8 10 10 15 19 19 12 10 11 11 10 6 6 6 3 0 3 6 6 8 8 6 6 7 7 8 8 9 9 10 13 10 10 8 11 7 6 8 8 6 6 8 8 8 8 8 10 10 8 8 10 8 8 9 8 10 9 11 12 10 8 8 8 8 10 10 11 12 10 10 10 8 8 6 6 6 6 8 6 6 6 8 10 8 10 10 10 12 9 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 10 10 9 10 10 8 8 8 8 11 8 8 8 8 8 8 8 8 7 7 7 11 11 11 10 10 9 10 7 8 8 8 10 8 6 8 6 6 6 6 6 9 7 8 8 8 10 9 8 10 8 8 8 8 6 8 8 6 6 6 8 8 8 8 8 3 0 3 8 8 8 8 8 8 8 8 8 11 9 8 8 6 6 6 6 8 10 10 10 8 8 8 6 6 6 6 8 6 6 6 6 8 6 6 8 6 7 8 8 6 6 8 8 11 8 8 8 8 8 9 10 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 8 7 6 8 8 8 8 8 8 8 8 8 8 6 6 9 6 6 6 8 8 6 6 6 6 8 6 7 6 10 6 9 9 10 11 9 8 8 8 8 8 10 10 8 9 9 9 9 10 8 10 8 8 8 6 8 8 8 8 8 8 6 6 6 6 6 6 8 10 10 10 10 11 11 16 25 26 16 13 13 13 12 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 9 15 7 6 6 6 6 6 6 6 6 9 9 8 8 8 6 6 6 6 8 8 10 10 10 10 10 8 10 8 8 8 10 10 8 8 8 8 8 8 8 10 9 9 9 8 8 8 8 8 8 8 16 16 19 12 10 8 8 8 8 8 9 8 8 9 10 10 11 8 8 6 7 7 6 6 6 7 6 6 6 9 7 8 10 8 8 6 6 6 8 10 12 12 10 8 8 7 7 7 8 6 10 7 9 9 9 9 9 8 8 8 8 8 8 6 7 8 8 8 8 6 6 6 6 7 6 6 6 7 13 8 8 8 8 8 6 6 8 8 12 10 8 8 8 8 6 8 8 3 0 3 10 8 8 6 6 8 8 8 8 8 8 8 8 10 8 8 8 8 8 6 10 7 6 6 6 7 7 12 12 13 8 8 8 8 10 10 10 8 8 8 8 9 9 9 9 12 10 11 11 17 10 10 10 10 7 7 6 6 6 6 6 8 8 8 8 8 12 12 8 8 8 9 9 11 11 12 3 0	Open. Hide. 8 8 12 8 6 8 6 6 6 8 8 8 12 10 8 8 9 13 21 15 17 17 15 22 10 8 8 8 13 14 22 28 17 15 17 13 11 10 10 11 12 13 23 14 14 14 24 27 36 36 36 21 23 12 11 11 25 25 59 59 36 24 22 12 9 8 8 19 19 24 41 41 50 31 31 36 36 38 38 42 36 36 47 47 47 40 40 36 36 39 43 48 57 57 68 68 47 47 42 42 48 43 48 48 48 54 54 54 54 54 57 54 54 68 54 57 57 57 47 47 47 57 57 57 48 48 47 57 57 68 68 57 50 47 47 47 50 50 57 57 57 57 59 57 57 57 47 43 50 44 48 48 50 57 57 57 57 57 57 57 57 57 57 54 57 57 57 52 52 57 57 59 59 57 54 54 54 57 57 57 52 52 37 41 41 50 50 50 57 57 57 57 57 57 57 52 52 52 52 52 52 52 52 52 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 52 52 57 52 52 52 52 52 45 52 57 57 57 57 57 62 62 62 62 52 52 43 44 35 35 35 43 39 43 39 43 43 43 39 31 31 35 44 44 43 35 35 43 43 52 62 62 62 62 62 62 62 62 44 44 35 43 43 39 39 43 43 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 52 52 52 43 43 35 35 35 44 44 68 68 62 62 62 62 52 43 43 31 31 31 43 43 52 62 52 43 43 39 39 39 43 43 52 52 57 57 57 57 57 43 43 35 43 43 39 39 39 57 39 41 39 43 43 52 59 43 43 33 23 23 33 38 43 42 27 27 20 20 20 20 32 23 29 27 43 38 29 29 29 38 44 44 43 32 32 32 37 37 52 52 52 44 43 38 36 20 27 27 43 44 52 57 52 43 43 43 50 50 43 36 36 32 23 23 32 36 42 43 44 43 43 37 40 32 29 29 28 33 32 35 37 39 36 36 28 28 28 30 42 28 25 18 15 12 19 19 32 32 32 24 12 12 12 12 15 15 34 24 30 28 24 24 13 14 14 18 15 19 19 19 13 12 12 15 11 12 12 12 15 21 21 13 13 13 21 21 18 21 13 10 8 8 8 12 8 10 12 21 11 11 12 17 16 15 14 14 16 15 15 12 14 15 13 19 12 13 8 8 8 10 11 12 15 11 12 11 18 18 28 12 11 8 8 8 10 13 11 8 8 8 8 8 9 9 9 9 10 12 13 12 10 8 8 8 8 8 8 8 8 8 8 8 10 9 9 9 9 8 8 7 7 6 8 8 8 8 7 6 6 6 8 6 8 8 8 12 10 8 8 8 8 10 8 11 9 10 10 10 9 10 11 11 11 11 11 17 16 11 11 8 11 8 8 10 8 9 10 11 11 11 11 10 6 8 6 6 8 10 16 16 11 11 11 18 22 16 16 8 8 6 7 10 15 13 15 9 9 8 8 8 8 6 6 6 6 8 8 10 8 8 8 8 6 7 8 6 6 10 8 8 8 8 8 8 8 8 8 9 13 14 10 8 8 8 10 10 10 8 8 9 8 10 8 8 8 12 10 6 6 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 10 10 12 9 9 9 9 9 8 8 8 8 8 8 8 8 10 8 9 9 9 9 9 9 12 15 12 12 12 16 11 11 8 8 6 6 8 8 14 30 19 19 12 12 12 13 12 10 9 9 11 10 8 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no539_l07.g1 MSMg01no539_l07.g1 CHROMAT_FILE:
MSMg01no539_l07.g1 PHD_FILE: MSMg01no539_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:45 2005
         (390 letters)



>mm_chr14_59483039_59483828
          Length = 790

 Score =  704 bits (364), Expect = 0.0
 Identities = 385/396 (97%), Gaps = 7/396 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atatcaggccattcttggaattaaggtgtaggtgatataagtcagagaacttctccatct 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 194 atatcaggccattcttggaattaaggtgtagatgatataagtcagagaacttctccatct 253

                                                                       
Query: 61  taagcttgcagtggaggaggaagtccagtttttttttccctttagattgaaaagttagac 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taagcttgcaatggaggaggaagtccagtttttttttccctttagattgaaaagttagac 313

                                                                       
Query: 121 attactattggagctaatttatacagaagatatctgctgtttctattagcagtgagtagt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 314 attactattggagctaatttatacagaagatatctgctgtttctattagcagtgagcagt 373

                                                                       
Query: 181 at-------ggtgggagttcaccagtaaacaggacacgcattgcctgcccttccgacatt 233
           ||       |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 attctccatggtgggagttcaccagtaaacaggacacgcattgcctgcccttccgacatt 433

                                                                       
Query: 234 tacattcttgggagaggagaaagacattactaagaggaagggggaatttacagcgtgcca 293
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tacattcttgggagaggagaaagacattactaagaggaagggggaatttacagcgtgcca 493

                                                                       
Query: 294 gatagtgatgtatgcaagatcgagctgtgactttgaactttggagtgataggagcagaga 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gatagtgatgtatgcaagatcgagctgtgactttgaactttggagtgataggagcagaga 553

                                               
Query: 354 tagatttcaagctacaaggctttaagagactcctaa 389
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 554 tagatttcaagctacgaggctttaagagactcctaa 589


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space:   297561
Effective search space used:   297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information