GGGGGTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCC
GCGGAATTCTGCAAGGCATTGATTTGCTTTGACTGAGGATTTATCATTCA
GCAAGGCACTCTACCCATTTTGGGCAGCCTCATTTCTGAGAAATAAAAAG
GTGTATTGGTCAACTGCATTCTGATTTGATTTTGTGTTTAAATCATCTTT
GCTACCTAATGGGTTCATAGGCAGAAAGAGTTCCCTCAGAACACTAATCT
TGGAAGATTAAAAAAAAAAAGTTGCTGGCCAACTACCAGTTCTATTTTTT
GATCAAGTAATTATATAAATACTTCAAACAGGGTTAATAAAATCGTGTTA
ATCCTAAGGAACTTGAGCAGGATTAGCTGTGTTTAGAAGGTAACTTTGGT
ATTTAGGCCATTGAGTGTTATATATAATTCTGGATGAAGGAAGCTAGAAA
AAAAAATGTACTGCCAACAAGCAAAAACAATACAAAGCCCAAATCCAAAA
CAACCCTTGTCCAGAAACTGATGGACAGATGGTGCAATATTTTCAGGGCA
AGCAGACATGGTGGCTCCTCCCTGTCTGCATTACCCAGAAGTTAAAAAAA
AAAAAAGGTGTGAAGAGATTGCTATTGTATGTTTTCTCAAGGCAAGACTC
AGATATGGCTAANAATGACATAATTTTAAAGCAATTGGAAATTATAGTCA
TAGCAAGCCTTCTCAAGAGCTTGTGAAAATATTCACCTGAACTCTTCGTA
TTGG

AGGATCGAGTGTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATG
GCTGAGAAGCATCTGAAAAAATGTTCAACATCCTTAATCTTCAGGGAAAT
GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTA
AGATCAAAAATTCAGGTGAAAGCAGATGCTGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG
GAAATCAGTCTGATGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGG
ATCCTGCAATACCTCTCTTGGGCATATATCCAGAAGATGTTCCACCTGGT
TAGAAGGACACATGCTCCACTATGTTCATAGCAGCTTTATTTGTAATAGC
CAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAA
AATGTGGTACATTTACACAATGGAGTACTACTCAGCTGTTAAAAAGAATG
AATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGAGCATCATCCCA
TGTGAGGTAACCCAATCACAAAAGAACTCACACAATATGTACTCACTGAT
AAGTGGATATTAGCCCAGAAACGTAGAATACCCAAGATATAAGATACAAT
TTTGCTAACCCGTGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACT
T

Query= MSMg01no544_i05.b1 MSMg01no544_i05.b1 CHROMAT_FILE:
MSMg01no544_i05.b1 PHD_FILE: MSMg01no544_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:12 2005
         (572 letters)



>mm_chr14_49927776_49928747
          Length = 972

 Score = 1069 bits (553), Expect = 0.0
 Identities = 556/557 (99%)
 Strand = Plus / Plus

                                                                       
Query: 16  gaattctgcaaggcattgatttgctttgactgaggatttatcattcagcaaggcactcta 75
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctgcaaggcaatgatttgctttgactgaggatttatcattcagcaaggcactcta 275

                                                                       
Query: 76  cccattttgggcagcctcatttctgagaaataaaaaggtgtattggtcaactgcattctg 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cccattttgggcagcctcatttctgagaaataaaaaggtgtattggtcaactgcattctg 335

                                                                       
Query: 136 atttgattttgtgtttaaatcatctttgctacctaatgggttcataggcagaaagagttc 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atttgattttgtgtttaaatcatctttgctacctaatgggttcataggcagaaagagttc 395

                                                                       
Query: 196 cctcagaacactaatcttggaagattaaaaaaaaaaagttgctggccaactaccagttct 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cctcagaacactaatcttggaagattaaaaaaaaaaagttgctggccaactaccagttct 455

                                                                       
Query: 256 attttttgatcaagtaattatataaatacttcaaacagggttaataaaatcgtgttaatc 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 attttttgatcaagtaattatataaatacttcaaacagggttaataaaatcgtgttaatc 515

                                                                       
Query: 316 ctaaggaacttgagcaggattagctgtgtttagaaggtaactttggtatttaggccattg 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctaaggaacttgagcaggattagctgtgtttagaaggtaactttggtatttaggccattg 575

                                                                       
Query: 376 agtgttatatataattctggatgaaggaagctagaaaaaaaaatgtactgccaacaagca 435
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agtgttatatataattctggatgaaggaagctagaaaaaaaaatgtactgccaacaagca 635

                                                                       
Query: 436 aaaacaatacaaagcccaaatccaaaacaacccttgtccagaaactgatggacagatggt 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaaacaatacaaagcccaaatccaaaacaacccttgtccagaaactgatggacagatggt 695

                                                                       
Query: 496 gcaatattttcagggcaagcagacatggtggctcctccctgtctgcattacccagaagtt 555
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gcaatattttcagggcaagcagacatggtggctcctccctgtctgcattacccagaagtt 755

                            
Query: 556 aaaaaaaaaaaaaggtg 572
           |||||||||||||||||
Sbjct: 756 aaaaaaaaaaaaaggtg 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)