Query= MSMg01no544_p12.b1 MSMg01no544_p12.b1 CHROMAT_FILE:
MSMg01no544_p12.b1 PHD_FILE: MSMg01no544_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:49 2005
(549 letters)
>mm_chr14_32863075_32864022
Length = 948
Score = 944 bits (488), Expect = 0.0
Identities = 512/520 (98%), Gaps = 1/520 (0%)
Strand = Plus / Plus
Query: 24 ggatgccgtctttcaccacagagcccgataagggatgagccatgactcttaggactttca 83
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggatgccgcctttcaccacagagcccgataagggatgagccatgactcttaggactttca 283
Query: 84 tcctgagtggtactcagggattagggaatatccaagacaaagaacagatctgagtataaa 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tcctgagtggtactcagggattagggaatatccaagacaaagaacagatctgagtataaa 343
Query: 144 aataagtatgaaactcaaaaaagccacagaaggttgaagttttaaccacgtaattaagtg 203
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 344 aataagtatgaaactcaaaaaagccacagaaggttgaagttttaatcacgtaattaagtg 403
Query: 204 cccctcagtgtgccctgtgagttggtcagttcctgtggcgtgactaacacaagctctgct 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cccctcagtgtgccctgtgagttggtcagttcctgtggcgtgactaacacaagctctgct 463
Query: 264 gtgagtcacaggctgccatgacacttgacacactgcaagtgggggcccaaaggactggcg 323
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gtgagtcacaggctgccacgacacttgacacactgcaagtgggggcccaaaggactggcg 523
Query: 324 tagtatggaaacggctctcaccagtctctcaccagcccactgctagatagcacagatgaa 383
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tagtaaggaaacggctctcaccagtctctcaccagcccactgctagatagcacagatgaa 583
Query: 384 ggcagggtcctcagagagacacacccataccaccgcatgcagggaaagtcagacaaggtt 443
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 584 ggcagggtcctcagagagacacacccataccaccgcatt-agggaaagtcagacaaggtt 642
Query: 444 gagccatgaaagaaccccagtacccagtactcagtaccttttcttgaagtccttaggatt 503
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 643 gagccatgaaagagccccagtacccagtactcagtaccttttcttaaagtccttaggatt 702
Query: 504 ttgttccctttttatccaaatgcacccttttccctacagc 543
||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ttgttccctttttatccaaatgcacccttttccctacagc 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space: 505582
Effective search space used: 505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_p12.g1 MSMg01no544_p12.g1 CHROMAT_FILE:
MSMg01no544_p12.g1 PHD_FILE: MSMg01no544_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:49 2005
(533 letters)
>mm_chr14_33031067_33031999
Length = 933
Score = 1007 bits (521), Expect = 0.0
Identities = 529/533 (99%), Gaps = 3/533 (0%)
Strand = Plus / Minus
Query: 1 tatgtgcaggctcgtcctaaccttgccatcctctagcctctttagtgctagaatgaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tatgtgcaggctcgtcctaaccttgccatcctctagcctctttagtgctagaatgaaaac 575
Query: 61 gtgcaccaccgtacctcactctaaaatgcattaaggaaagtttcctggcatttttgtaga 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gtgcaccaccgtatctcactctaaaatgcattaaggaaagtttcctggcatttttgtaga 515
Query: 121 gagaggcgctgctgccaccctgctctggaggtgctcttaccacgctgactgcagagagcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gagaggcgctgctgccaccctgctctggaggtgctcttaccacgctgactgcagagagcg 455
Query: 181 gctgcagctagggagaagcacttcacagcatacatacggagtaggaggggctatgtgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gctgcagctagggagaagcacttcacagcatacatacggagtaggaggggctatgtgctt 395
Query: 241 ttgtgtcttttcacctaaacctctaagttctggagtaatctaaagaaacaacctgaacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttgtgtcttttcacctaaacctctaagttctggagtaatctaaagaaacaacctgaacta 335
Query: 301 taggaatatatacatatacataaaacacaagctacttctgtataattacgcatatacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 taggaatatatacatatacataaaacacaagctacttctgtataattacgcatatacaca 275
Query: 361 cattactattgtgtaaaatttagcaatctatatattagtatagtagttattttatatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cattactattgtgtaaaatttagcaatctatatattagtatagtagttattttatatatc 215
Query: 421 aagtcatgatacctgcgtggtggctcatatttgtaatcccagcgttgaggagactagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aagtcatgatacctgcgtggtggctcatatttgtaatcccagcgttgaggagactagcag 155
Query: 481 ggccatgaggagttcaagggcagcctaagttaaaaagggagaccctgtctaaa 533
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ggccat---gagttcaagggcagcctaagttaaaaagggagaccctgtctaaa 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
