Query= MSMg01no545_e09.b1 MSMg01no545_e09.b1 CHROMAT_FILE:
MSMg01no545_e09.b1 PHD_FILE: MSMg01no545_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:12 2005
(676 letters)
>mm_chr14_88416364_88417439
Length = 1076
Score = 1301 bits (673), Expect = 0.0
Identities = 673/673 (100%)
Strand = Plus / Minus
Query: 4 ggaattctaactgcaccacaataaaccacacaattttttaccatcttaatccatgccaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ggaattctaactgcaccacaataaaccacacaattttttaccatcttaatccatgccaat 735
Query: 64 gtgtatgcttcatgatatgtaatccctcacttacccacaatgttcctacttctttctgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gtgtatgcttcatgatatgtaatccctcacttacccacaatgttcctacttctttctgct 675
Query: 124 ctcttaacataagtggactctgttttagtgcatttttcaccctgagcatagactattatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctcttaacataagtggactctgttttagtgcatttttcaccctgagcatagactattatt 615
Query: 184 caacctctttgaatagccaagttttgttttgttttgttttgttttgttttgttttgtttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 caacctctttgaatagccaagttttgttttgttttgttttgttttgttttgttttgtttg 555
Query: 244 gaactctttatatgtcatgcattcagaaaataaatattacctgaattaatcatagagcca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaactctttatatgtcatgcattcagaaaataaatattacctgaattaatcatagagcca 495
Query: 304 atgcattgtattgatgaattgcaaatctttgaagatcacttaatagttgtacttttaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atgcattgtattgatgaattgcaaatctttgaagatcacttaatagttgtacttttaaaa 435
Query: 364 atattttaaaaatgttttcgtcttcttcagtgtaatcattgaagaacaaagatactgtgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atattttaaaaatgttttcgtcttcttcagtgtaatcattgaagaacaaagatactgtgt 375
Query: 424 gttcacttgctttgctctccatatctagaaaacaatgacttgtccataaaaataagttag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gttcacttgctttgctctccatatctagaaaacaatgacttgtccataaaaataagttag 315
Query: 484 agaatgagtgatataaatgaatccccaacaggaaacataaagactcatcattaaaacaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agaatgagtgatataaatgaatccccaacaggaaacataaagactcatcattaaaacaca 255
Query: 544 aattaatatttttatgtaaattttagaatgagctgaaggatcagtgggtgaaaatcacaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aattaatatttttatgtaaattttagaatgagctgaaggatcagtgggtgaaaatcacaa 195
Query: 604 aaatcaaaatgtggtctctgacaaaatctgcttgtagtaactattgttctgactgcactt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aaatcaaaatgtggtctctgacaaaatctgcttgtagtaactattgttctgactgcactt 135
Query: 664 ctgtgggcaattg 676
|||||||||||||
Sbjct: 134 ctgtgggcaattg 122
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_e09.g1 MSMg01no545_e09.g1 CHROMAT_FILE:
MSMg01no545_e09.g1 PHD_FILE: MSMg01no545_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:12 2005
(571 letters)
>mm_chr14_88256721_88257690
Length = 970
Score = 1079 bits (558), Expect = 0.0
Identities = 569/574 (99%), Gaps = 4/574 (0%)
Strand = Plus / Plus
Query: 1 aattaatctctacaggcactagcattgaaggaagtgtgagttcacaggcgattaaatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aattaatctctacaggcactagcattgaaggaagtgtgagttcacaggcgattaaatcct 257
Query: 61 attacttaccctccagatactgtgaccctaatggagtataaaatacgggagtgat---tt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 258 attacttaccctccagatactgtgaccctaatggagtataaaatacgggagtgatgattt 317
Query: 118 gatttgcttgatgtgaattagtctatttatttttttctttttattttactccttatactg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gatttgcttgatgtgaattagtctatttatttttttctttttattttactccttatactg 377
Query: 178 tgttatttctctagttgttgttttcttctaactgtgatttggtctctatactgtactgtc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgttatttctctagttgttgttttcttctaactgtgatttggtctctatactgtactgtc 437
Query: 238 tgttgctttgattttagaaacatctaaacatacaacccagtattttcttgtataagaaaa 297
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgttactttgattttagaaacatctaaacatacaacccagtattttcttgtataagaaaa 497
Query: 298 tatgatattaaattgacaattctctctcctttcttcccatcctgtcccattcgacacccc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tatgatattaaattgacaattctctctcctttcttcccatcctgtcccattcgacacccc 557
Query: 358 tatcaatccttcccctccacattccatctccttccttcctcctctctcctttcatcatcc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tatcaatccttcccctccacattccatctccttccttcctcctctctcctttcatcatcc 617
Query: 418 tttcatagaatatctaagtggtccctgttcagctttttcaattgagggactgcatgttta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tttcatagaatatctaagtggtccctgttcagctttttcaattgagggactgcatgttta 677
Query: 478 ctcaggctagtctgattcatagctcattgcttccccagtacagctatgaactgattaaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctcaggctagtctgattcatagctcattgcttccccagtacagctatgaactgattaaaa 737
Query: 538 agtgacttgatgctactttgagtttttgagaaat 571
|||||||||||||||||||||||||||||||||
Sbjct: 738 -gtgacttgatgctactttgagtttttgagaaat 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 970
Length adjustment: 10
Effective length of query: 561
Effective length of database: 960
Effective search space: 538560
Effective search space used: 538560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
