Query= MSMg01no545_p01.b1 MSMg01no545_p01.b1 CHROMAT_FILE:
MSMg01no545_p01.b1 PHD_FILE: MSMg01no545_p01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:03 2005
(698 letters)
>mm_chr14_37546134_37547231
Length = 1098
Score = 1321 bits (683), Expect = 0.0
Identities = 689/691 (99%)
Strand = Plus / Plus
Query: 8 gaattcactgattctcatgccaacctcacccagattactctcacccagaaacacccagaa 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcactgattctaatgccaacctcacccagattactctcacccagaaacacccagaa 267
Query: 68 atgatgttttattacaatgtcacacggccagtaagctgatccacaaatagccatcgcagc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atgatgttttattacaatgtcacacggccagtaagctgatccacaaatagccatcgcagc 327
Query: 128 cactgttgtaagaaacaaaggtctcaggatactatctaagtctgtgcgacccaagtgaga 187
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cactgttgtaagaaaaaaaggtctcaggatactatctaagtctgtgcgacccaagtgaga 387
Query: 188 attaagtacttgttttctttcagtaacaaacaccagtggcattgtaattcacctaaacag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attaagtacttgttttctttcagtaacaaacaccagtggcattgtaattcacctaaacag 447
Query: 248 ctgtgcacatgcttaataaaaatttacatatatatttttgagttggctttctaccactat 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctgtgcacatgcttaataaaaatttacatatatatttttgagttggctttctaccactat 507
Query: 308 aacaaacatgtgagatcagttggcttataaagattcttttgttctctgttttattttgtt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aacaaacatgtgagatcagttggcttataaagattcttttgttctctgttttattttgtt 567
Query: 368 ctgagacatggtctcactacatgacctaaggctgccctctaactgtttacttcatgacct 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctgagacatggtctcactacatgacctaaggctgccctctaactgtttacttcatgacct 627
Query: 428 ggaagtagcaaatcattcatacatataaattacaaataaacaagtcttcttaggaagacc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggaagtagcaaatcattcatacatataaattacaaataaacaagtcttcttaggaagacc 687
Query: 488 aaaacaacctaaagtgattaacagtgagctggtgaagtaaatcatgccatttacataaac 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaaacaacctaaagtgattaacagtgagctggtgaagtaaatcatgccatttacataaac 747
Query: 548 agaatattttatctttatatccttttaaatgctaatatatggaaatatctttaatttaca 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 agaatattttatctttatatccttttaaatgctaatatatggaaatatctttaatttaca 807
Query: 608 ttgattaaaatatttcaaaatggtagcataatactggatcatatgtcaaaatattaaatg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ttgattaaaatatttcaaaatggtagcataatactggatcatatgtcaaaatattaaatg 867
Query: 668 tatttgatctacatctattttagcatattcg 698
|||||||||||||||||||||||||||||||
Sbjct: 868 tatttgatctacatctattttagcatattcg 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_p01.g1 MSMg01no545_p01.g1 CHROMAT_FILE:
MSMg01no545_p01.g1 PHD_FILE: MSMg01no545_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:03 2005
(629 letters)
>mm_chr14_37705481_37706509
Length = 1029
Score = 1129 bits (584), Expect = 0.0
Identities = 622/642 (96%), Gaps = 13/642 (2%)
Strand = Plus / Minus
Query: 1 cctgtgaatactaggctggccttgaacccagcagagtctcaagtgcctgtgtttcctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 cctgtgaatactaggctggccttgaacccagcagagtctcaagtgcctgtgtttcctgag 762
Query: 61 tgtggagattaaatcaccaacaagcccagttgaaggttcattttaaatatat--agttac 118
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 761 tgtggagattaaatcaccaacaagcccagttgaaggttcattttaaatatataaagttac 702
Query: 119 agatctagctgtggttggtgcagtcctgttgacgccagcacttgtaggctgatgtaacag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 agatctagctgtggttggtgcagtcctgttgacgccagcacttgtaggctgatgtaacag 642
Query: 179 gatagccacaagtccaaagcaagtctgtgctttatagcggaccttgttgcttttct---- 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gatagccacaagtccaaagcaagtctgtgctttatagcggaccttgttgcttttctcaga 582
Query: 235 -------tttactgatcttgtactagcccactcttaagaacagcattatttaacattgaa 287
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggtagtctttactgatcttgtactagcccactcttaagaacagcattatttaacattgaa 522
Query: 288 ttccaataataattaaacaaaaagacagcatgaatttgagaaggagtaggggcatatagg 347
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 521 ttccaataataattaaacaaaaagacagcatgaatttgagaaggagtgggggcatatagg 462
Query: 348 aaaagttgggaaaagggaagtgatgtgattatatttaattagaaaattatgaaataaatt 407
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 461 aaaagttaggaaaagggaagtgatgtgattatatttcattagaaaattatgaaataaatt 402
Query: 408 atttggatgaaaaaacataggacaagaacgaaattttattaccctgtgtacttccagtat 467
||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 401 attcgcatgaaaaaacataggacaagaatgaaattttattaccctgtgtacttccagtat 342
Query: 468 tgttttaaaactgtttaagcttaatatttagatataggaagtcagtttgcacattaaatt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgttttaaaactgtttaagcttaatatttagatataggaagtcagtttgcacattaaatt 282
Query: 528 caaaattatccggatgtattctaagttaccactcagtcatttgtttgagcaccttaacgt 587
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 281 caaaattatccggatgtattctaagttaccagtcagtcatttgtttgagcaccttaacgt 222
Query: 588 aaataattacacaaattaatcctcagtctccatcagacagca 629
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aaataattacacaaattaatcctcagtctccatcagacagca 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
